C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: small integral membrane protein 13
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000224531 SMIM13 9606 + 6:11094033-11138733 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000376935 SMIM13-001 11094231-11135811 nonsense_mediated_decay
  ENST00000416247 SMIM13-002 11094033-11138733 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000376935ENST00000416247
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000376935 N/A N/A 0.564±0.00 N/A N/A 0.579±0.00 0.296±0.00 N/A 1.124±0.00 N/A 0.380±0.00 1.456±0.00 1.730±0.00 2.119±0.00
ENST00000416247 1.382±0.00 1.575±0.00 0.392±0.00 10.125±2.89 0.928±0.14 1.772±0.81 0.984±0.89 0.938±0.53 0.993±0.03 1.590±0.15 0.530±0.00 1.303±0.30 1.875±0.36 1.529±0.65

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000384 CIL_000384_0001 CGP 6:10980759-11138733

Gene Ontology
GO IDEvidence TypeGO Description
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000076744 SMIM13 (1 of 2) small integral membrane protein 13 protein_coding Danio_rerio
ENSDARG00000089204 SMIM13 (2 of 2) small integral membrane protein 13 protein_coding Danio_rerio
ENSMUSG00000091264 Smim13 small integral membrane protein 13 protein_coding Mus_musculus

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