C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_000384_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000197977-ENSG00000224531 CGP 9606 6:10980759-11138733
GeneTranscriptPositionBiotype
ENSG00000197977 (ELOVL2)
ELOVL fatty acid elongase 2
ENST00000354666 (ELOVL2-001) 10980759-11044314 protein_coding
ENSG00000224531 (SMIM13)
small integral membrane protein 13
ENST00000376935 (SMIM13-001) 11094231-11135811 nonsense_mediated_decay
ENST00000416247 (SMIM13-002) 11094033-11138733 protein_coding
ENSG00000230314 (ELOVL2-AS1)
ELOVL2 antisense RNA 1
ENST00000456190 (ELOVL2-AS1-002) 11043760-11078066 antisense
ENST00000456616 (ELOVL2-AS1-001) 11044693-11078226 antisense
ENST00000606532 (ELOVL2-AS1-003) 11043524-11078076 antisense
ENST00000607275 (ELOVL2-AS1-004) 11044513-11077818 antisense
ENSG00000244476 (ERVFRD-1)
endogenous retrovirus group FRD, member 1
ENST00000472091 (ERVFRD-1-001) 11102489-11111732 protein_coding
ENST00000542862 (ERVFRD-1-201) 11102491-11105674 protein_coding
ENSG00000274541 (RP1-62D2.4)
ENST00000620852 (RP1-62D2.4-001) 11015586-11015888 processed_pseudogene
CIL_000384_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000021364-ENSMUSG00000091264 CGP 10090 13:41182495-41276574
GeneTranscriptPositionBiotype
ENSMUSG00000021364 (Elovl2)
elongation of very long chain fatty acids (FEN1/Elo2, SUR4/Elo3, yeast)-like 2
ENSMUST00000021793 (Elovl2-001) 41182495-41220405 protein_coding
ENSMUST00000117096 (Elovl2-002) 41182499-41220162 protein_coding
ENSMUSG00000091264 (Smim13)
small integral membrane protein 13
ENSMUST00000165561 (Smim13-001) 41249860-41276574 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000384_0001ENSG00000197977ENST00000354666ENSG00000224531ENST00000376935ENST00000416247ENSG00000230314ENST00000456190ENST00000456616ENST00000606532ENST00000607275ENSG00000244476ENST00000472091ENST00000542862ENSG00000274541ENST00000620852CIL_000384_0002ENSMUSG00000021364ENSMUST00000021793ENSMUST00000117096ENSMUSG00000091264ENSMUST00000165561
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_000384_0001ENSG00000197977ENST00000354666ENSG00000224531ENST00000376935ENST00000416247ENSG00000230314ENST00000456190ENST00000456616ENST00000606532ENST00000607275ENSG00000244476ENST00000472091ENST00000542862ENSG00000274541ENST00000620852CIL_000384_0002ENSMUSG00000021364ENSMUST00000021793ENSMUST00000117096ENSMUSG00000091264ENSMUST00000165561
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000197977 ENST00000354666 0.146±0.00 1.211±0.00 N/A 4.528±0.92 0.261±0.05 0.349±0.00 1.154±0.51 5.708±5.65 2.611±2.16 0.079±0.05 0.139±0.00 0.191±0.08 6.435±1.83 3.896±0.31
ENSG00000224531 ENST00000376935 N/A N/A 0.564±0.00 N/A N/A 0.579±0.00 0.296±0.00 N/A 1.124±0.00 N/A 0.380±0.00 1.456±0.00 1.730±0.00 2.119±0.00
ENST00000416247 1.382±0.00 1.575±0.00 0.392±0.00 10.125±2.89 0.928±0.14 1.772±0.81 0.984±0.89 0.938±0.53 0.993±0.03 1.590±0.15 0.530±0.00 1.303±0.30 1.875±0.36 1.529±0.65
ENSG00000230314 ENST00000456190 N/A N/A N/A 0.141±0.09 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.824±0.00
ENST00000456616 N/A 0.093±0.00 N/A 0.080±0.00 N/A N/A 0.070±0.00 N/A N/A N/A N/A N/A 0.137±0.08 1.897±0.00
ENST00000606532 N/A N/A N/A 0.256±0.00 N/A N/A N/A N/A 0.046±0.00 N/A N/A 0.036±0.00 0.289±0.00 N/A
ENST00000607275 N/A N/A N/A 0.151±0.00 0.144±0.00 N/A N/A N/A N/A N/A N/A N/A 0.255±0.00 N/A
ENSG00000244476 ENST00000472091 N/A N/A N/A 0.010±0.00 N/A 0.373±0.26 N/A N/A 0.110±0.00 0.304±0.21 0.010±0.00 0.005±0.00 5.815±1.58 0.013±0.00
ENST00000542862 0.072±0.00 0.187±0.00 0.235±0.00 0.068±0.06 0.276±0.10 N/A 0.051±0.01 0.284±0.03 0.286±0.18 0.093±0.00 0.010±0.00 0.111±0.11 2.980±0.61 0.105±0.04
ENSG00000274541 ENST00000620852 N/A N/A N/A N/A N/A N/A N/A N/A 0.152±0.00 N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000021364 ENSMUST00000021793 0.097±0.07 0.087±0.04 0.051±0.02 9.412±5.92 0.207±0.16 0.028±0.01 0.034±0.02 19.066±2.24 85.346±51.55 0.046±0.02 0.013±0.01 0.915±0.24 2.032±2.60 19.572±6.95
ENSMUST00000117096 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.001±0.00 N/A N/A 34.056±17.07
ENSMUSG00000091264 ENSMUST00000165561 4.562±1.26 6.119±2.10 4.385±0.04 11.871±5.56 6.996±1.11 3.243±1.02 6.463±0.64 2.566±0.39 3.781±0.69 6.041±0.47 10.027±0.90 9.368±3.40 3.648±1.04 8.498±3.57

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