C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: uncharacterized LOC729467
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000224609 HSD52 9606 - 1:59131936-59208121 processed_transcript
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000425914 HSD52-001 59131936-59146875 lincRNA
  ENST00000436225 HSD52-002 59132514-59198621 lincRNA
  ENST00000585367 HSD52-003 59132376-59146834 lincRNA
  ENST00000587839 HSD52-005 59132707-59146827 retained_intron
  ENST00000592607 HSD52-004 59132376-59146834 lincRNA
  ENST00000623433 HSD52-007 59132376-59208105 lincRNA
  ENST00000624265 HSD52-009 59132376-59208121 lincRNA
  ENST00000624582 HSD52-006 59132376-59203468 lincRNA
  ENST00000625069 HSD52-008 59132376-59208087 lincRNA

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000425914ENST00000436225ENST00000585367ENST00000592607ENST00000623433ENST00000624265
Transcript ID Adipose Brain Breast Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000425914 0.073±0.00 N/A 0.213±0.00 N/A 0.023±0.00 N/A 0.200±0.15 N/A 0.038±0.00 N/A 4.439±1.18
ENST00000436225 0.053±0.00 N/A N/A 0.014±0.00 N/A N/A N/A 0.068±0.00 N/A N/A N/A
ENST00000585367 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.242±0.00 3.568±0.00
ENST00000592607 N/A N/A N/A N/A N/A N/A N/A N/A 0.033±0.00 0.024±0.00 N/A
ENST00000623433 0.100±0.00 N/A N/A N/A N/A 0.323±0.00 N/A N/A N/A N/A N/A
ENST00000624265 N/A 0.096±0.00 N/A N/A N/A N/A N/A N/A 0.057±0.00 0.147±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008Y5 CIL_0008Y5_0001 VISTA 1:58756653-59358420
CIL_0007ZB CIL_0007ZB_0001 VISTA 1:58756772-59358111
CIL_0001N7 CIL_0001N7_0001 CGP 1:58780788-59767675

Gene Ontology
No GO terms available.

Homologs

No Homologs available.

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