C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001N7_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000177606-ENSG00000172456 CGP 9606 1:58780788-59767675
GeneTranscriptPositionBiotype
ENSG00000172456 (FGGY)
FGGY carbohydrate kinase domain containing 		ENST00000303721 (FGGY-001) 59296991-59762730 protein_coding
ENST00000371210 (FGGY-002) 59553918-59762728 protein_coding
ENST00000371212 (FGGY-006) 59310087-59762728 protein_coding
ENST00000371218 (FGGY-005) 59296981-59762724 protein_coding
ENST00000413489 (FGGY-007) 59296795-59378837 protein_coding
ENST00000430447 (FGGY-004) 59297012-59699394 nonsense_mediated_decay
ENST00000462744 (FGGY-009) 59296855-59346369 processed_transcript
ENST00000466791 (FGGY-014) 59638228-59680995 processed_transcript
ENST00000471169 (FGGY-013) 59673686-59762727 processed_transcript
ENST00000472783 (FGGY-012) 59673657-59762544 processed_transcript
ENST00000474476 (FGGY-008) 59296838-59660293 processed_transcript
ENST00000475949 (FGGY-010) 59393208-59626023 processed_transcript
ENST00000476939 (FGGY-017) 59660219-59767675 processed_transcript
ENST00000480847 (FGGY-016) 59755672-59762724 processed_transcript
ENST00000485720 (FGGY-011) 59512316-59660423 processed_transcript
ENST00000493891 (FGGY-015) 59626015-59762730 processed_transcript
ENST00000495718 (FGGY-003) 59296984-59626854 retained_intron
ENST00000582567 (FGGY-020) 59296638-59321712 protein_coding
ENST00000583635 (FGGY-019) 59296986-59316306 processed_transcript
ENSG00000177606 (JUN)
jun proto-oncogene 		ENST00000371222 (JUN-001) 58780788-58784327 protein_coding
ENSG00000224609 (HSD52)
uncharacterized LOC729467 		ENST00000425914 (HSD52-001) 59131936-59146875 lincRNA
ENST00000436225 (HSD52-002) 59132514-59198621 lincRNA
ENST00000585367 (HSD52-003) 59132376-59146834 lincRNA
ENST00000587839 (HSD52-005) 59132707-59146827 retained_intron
ENST00000592607 (HSD52-004) 59132376-59146834 lincRNA
ENST00000623433 (HSD52-007) 59132376-59208105 lincRNA
ENST00000624265 (HSD52-009) 59132376-59208121 lincRNA
ENST00000624582 (HSD52-006) 59132376-59203468 lincRNA
ENST00000625069 (HSD52-008) 59132376-59208087 lincRNA
ENSG00000226883 (RP4-782L23.2)
 ENST00000443012 (RP4-782L23.2-001) 59754747-59789182 antisense
ENSG00000228121 (PHBP3)
prohibitin pseudogene 3 		ENST00000412562 (PHBP3-001) 58999676-59000494 processed_pseudogene
ENSG00000230812 (LINC01358)
long intergenic non-protein coding RNA 1358 		ENST00000424308 (LINC01358-003) 59020599-59023020 lincRNA
ENST00000438195 (LINC01358-001) 59020588-59044614 lincRNA
ENST00000447329 (LINC01358-002) 59020387-59033063 lincRNA
ENSG00000231740 (RP11-63G10.2)
 ENST00000424592 (RP11-63G10.2-001) 58838448-58851254 lincRNA
ENSG00000232453 (RP4-794H19.1)
 ENST00000423408 (RP4-794H19.1-001) 58882868-58896665 lincRNA
ENST00000427292 (RP4-794H19.1-002) 58895845-58896703 lincRNA
ENSG00000234807 (LINC01135)
long intergenic non-protein coding RNA 1135 		ENST00000419531 (LINC01135-002) 58785160-58899594 lincRNA
ENSG00000235215 (RP11-145M4.2)
 ENST00000451090 (RP11-145M4.2-001) 59055999-59078116 lincRNA
ENSG00000237352 (RP11-145M4.3)
 ENST00000449812 (RP11-145M4.3-001) 59056643-59088195 lincRNA
ENSG00000241042 (RP11-145M4.1)
 ENST00000422198 (RP11-145M4.1-001) 59054397-59056049 lincRNA
ENSG00000270457 (RP11-467C18.1)
 ENST00000604999 (RP11-467C18.1-001) 59289303-59289640 lincRNA
ENSG00000272226 (RP11-63G10.3)
 ENST00000607372 (RP11-63G10.3-001) 58812808-58813342 lincRNA
CIL_0001N7_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000052684-ENSMUSG00000028573 CGP 10090 4:95049034-95926939
GeneTranscriptPositionBiotype
ENSMUSG00000028573 (Fggy)
FGGY carbohydrate kinase domain containing 		ENSMUST00000043335 (Fggy-003) 95579421-95821569 protein_coding
ENSMUST00000079223 (Fggy-001) 95557507-95926939 protein_coding
ENSMUST00000107091 (Fggy-005) 95585244-95926804 protein_coding
ENSMUST00000125742 (Fggy-016) 95636887-95821982 processed_transcript
ENSMUST00000130541 (Fggy-015) 95769509-95926939 protein_coding
ENSMUST00000131654 (Fggy-006) 95585244-95812169 nonsense_mediated_decay
ENSMUST00000134012 (Fggy-007) 95579494-95769436 protein_coding
ENSMUST00000141248 (Fggy-002) 95557519-95926935 processed_transcript
ENSMUST00000142384 (Fggy-004) 95849625-95926934 nonsense_mediated_decay
ENSMUST00000143742 (Fggy-012) 95623556-95738922 nonsense_mediated_decay
ENSMUST00000147766 (Fggy-011) 95623549-95877103 processed_transcript
ENSMUST00000147783 (Fggy-009) 95579484-95601057 processed_transcript
ENSMUST00000150830 (Fggy-010) 95579489-95597656 protein_coding
ENSMUST00000153119 (Fggy-013) 95738408-95769445 processed_transcript
ENSMUST00000156223 (Fggy-017) 95821978-95926804 protein_coding
ENSMUST00000176162 (Fggy-018) 95557511-95840654 processed_transcript
ENSMUST00000176840 (Fggy-014) 95586915-95738865 processed_transcript
ENSMUST00000177394 (Fggy-008) 95557520-95597650 protein_coding
ENSMUSG00000052684 (Jun)
jun proto-oncogene 		ENSMUST00000107094 (Jun-001) 95049034-95052222 protein_coding
ENSMUSG00000084939 (Gm830)
predicted gene 830 		ENSMUST00000142458 (Gm830-001) 95464724-95487394 processed_transcript
ENSMUSG00000085377 (4930551L18Rik)
RIKEN cDNA 4930551L18 gene 		ENSMUST00000156086 (4930551L18Rik-001) 95089083-95091419 lincRNA
ENSMUSG00000085835 (Gm12707)
predicted gene 12707 		ENSMUST00000155789 (Gm12707-001) 95483956-95487401 processed_transcript
ENSMUSG00000093492 (Gm20651)
predicted gene 20651 		ENSMUST00000177219 (Gm20651-001) 95561831-95562159 processed_pseudogene
ENSMUSG00000100129 (RP23-231H10.1)
predicted gene 29064 		ENSMUST00000187014 (RP23-231H10.1-001) 95401978-95402790 lincRNA
ENSMUSG00000100189 (RP23-77I17.4)
predicted gene 28096 		ENSMUST00000191391 (RP23-77I17.4-001) 95151740-95157503 sense_intronic

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001N7_0001ENSG00000172456ENST00000303721ENST00000371210ENST00000371218ENST00000413489ENST00000430447ENST00000471169ENST00000472783ENST00000474476ENST00000475949ENST00000493891ENSG00000177606ENST00000371222ENSG00000224609ENST00000425914ENST00000436225ENST00000585367ENST00000592607ENST00000623433ENST00000624265ENSG00000226883ENST00000443012ENSG00000228121ENST00000412562ENSG00000230812ENST00000424308ENST00000438195ENST00000447329ENSG00000231740ENST00000424592ENSG00000232453ENST00000423408ENST00000427292ENSG00000234807ENST00000419531ENSG00000235215ENST00000451090ENSG00000237352ENST00000449812ENSG00000241042ENST00000422198ENSG00000270457ENST00000604999ENSG00000272226ENST00000607372CIL_0001N7_0002ENSMUSG00000028573ENSMUST00000043335ENSMUST00000079223ENSMUST00000107091ENSMUST00000125742ENSMUST00000130541ENSMUST00000131654ENSMUST00000134012ENSMUST00000141248ENSMUST00000156223ENSMUST00000176162ENSMUSG00000052684ENSMUST00000107094ENSMUSG00000084939ENSMUST00000142458ENSMUSG00000085377ENSMUST00000156086ENSMUSG00000085835ENSMUST00000155789ENSMUSG00000093492ENSMUST00000177219ENSMUSG00000100129ENSMUST00000187014ENSMUSG00000100189ENSMUST00000191391
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000172456 ENST00000303721 0.556±0.00 0.775±0.00 N/A 2.076±0.00 1.794±1.16 1.901±0.00 1.299±0.43 3.880±0.56 3.868±0.91 2.372±0.00 N/A 1.100±0.47 1.755±0.66 4.854±0.00
ENST00000371210 N/A 0.694±0.00 N/A N/A N/A N/A 1.572±0.00 1.736±0.00 26.918±0.00 2.508±0.00 5.721±0.00 1.586±0.84 N/A 2.649±0.00
ENST00000371212 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000371218 N/A 0.574±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.883±0.00
ENST00000413489 N/A N/A 4.963±0.00 4.127±0.00 0.773±0.00 2.088±0.00 0.958±0.00 5.354±0.00 5.794±0.00 2.776±0.00 8.890±0.00 1.148±0.00 2.542±0.00 3.233±0.00
ENST00000430447 N/A N/A N/A N/A N/A 0.556±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000462744 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000466791 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000471169 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.105±0.00 1.360±0.00 N/A
ENST00000472783 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.122±0.00 N/A N/A
ENST00000474476 1.409±0.00 0.900±0.00 N/A N/A 0.619±0.00 2.020±0.00 2.274±0.00 2.308±0.00 N/A 1.259±0.00 N/A 2.750±0.00 1.247±0.00 1.697±0.00
ENST00000475949 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.629±0.00
ENST00000476939 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000480847 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000485720 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000493891 N/A N/A N/A 1.037±0.00 N/A N/A N/A N/A N/A N/A 1.855±0.00 1.412±0.00 1.976±0.00 N/A
ENST00000495718 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000582567 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000583635 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000177606 ENST00000371222 118.747±0.00 62.984±0.00 13.580±0.00 18.934±11.91 69.932±46.12 44.641±30.23 14.834±4.85 16.760±14.78 15.284±10.05 75.834±44.64 30.330±2.93 127.890±140.80 75.248±15.18 37.210±10.42
ENSG00000224609 ENST00000425914 0.073±0.00 N/A N/A N/A 0.213±0.00 N/A N/A 0.023±0.00 N/A 0.200±0.15 N/A 0.038±0.00 N/A 4.439±1.18
ENST00000436225 0.053±0.00 N/A N/A N/A N/A N/A 0.014±0.00 N/A N/A N/A 0.068±0.00 N/A N/A N/A
ENST00000585367 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.242±0.00 3.568±0.00
ENST00000587839 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000592607 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.033±0.00 0.024±0.00 N/A
ENST00000623433 0.100±0.00 N/A N/A N/A N/A N/A N/A N/A 0.323±0.00 N/A N/A N/A N/A N/A
ENST00000624265 N/A N/A N/A 0.096±0.00 N/A N/A N/A N/A N/A N/A N/A 0.057±0.00 0.147±0.00 N/A
ENST00000624582 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000625069 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000226883 ENST00000443012 N/A 0.086±0.00 0.074±0.00 0.107±0.00 0.154±0.08 N/A N/A N/A N/A 0.042±0.00 N/A N/A N/A 0.083±0.01
ENSG00000228121 ENST00000412562 N/A 0.045±0.00 N/A N/A 0.024±0.00 0.064±0.00 N/A 0.046±0.00 N/A 0.022±0.00 N/A N/A N/A 0.033±0.01
ENSG00000230812 ENST00000424308 N/A N/A N/A N/A N/A N/A 0.325±0.00 N/A 2.367±0.00 0.800±0.00 N/A N/A 0.921±0.70 N/A
ENST00000438195 N/A 0.315±0.00 0.361±0.00 N/A 0.044±0.00 N/A N/A 0.180±0.00 N/A N/A N/A 0.702±0.40 0.182±0.00 0.118±0.03
ENST00000447329 0.026±0.00 0.241±0.00 N/A 0.028±0.00 N/A N/A 0.434±0.34 0.154±0.00 N/A 0.285±0.00 N/A 0.471±0.09 0.102±0.01 0.088±0.01
ENSG00000231740 ENST00000424592 N/A N/A N/A N/A N/A N/A N/A N/A 1.532±0.00 N/A N/A 0.094±0.00 N/A N/A
ENSG00000232453 ENST00000423408 0.088±0.00 0.091±0.00 0.281±0.00 0.623±0.12 0.396±0.00 0.563±0.05 0.339±0.17 0.690±0.37 0.157±0.00 0.448±0.00 0.320±0.00 0.500±0.29 0.357±0.12 0.429±0.05
ENST00000427292 0.094±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000234807 ENST00000419531 0.057±0.00 0.061±0.00 N/A 0.756±0.00 0.131±0.00 0.156±0.00 0.076±0.00 0.127±0.00 0.062±0.00 0.138±0.00 0.230±0.00 0.320±0.27 0.066±0.01 0.129±0.07
ENSG00000235215 ENST00000451090 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.097±0.00
ENSG00000237352 ENST00000449812 N/A 0.116±0.00 N/A 0.066±0.02 0.015±0.00 0.015±0.00 0.015±0.00 0.049±0.00 N/A N/A N/A 0.194±0.01 0.144±0.12 0.059±0.00
ENSG00000241042 ENST00000422198 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.580±0.00 N/A N/A
ENSG00000270457 ENST00000604999 N/A 0.254±0.00 N/A 0.439±0.16 N/A N/A 0.229±0.00 N/A N/A N/A 0.594±0.00 0.201±0.11 N/A 0.112±0.00
ENSG00000272226 ENST00000607372 N/A 0.108±0.00 0.237±0.00 0.387±0.30 0.055±0.00 0.476±0.25 0.026±0.00 0.299±0.00 0.468±0.00 0.459±0.00 N/A 0.148±0.07 0.066±0.00 0.787±0.26
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000028573 ENSMUST00000043335 N/A N/A N/A N/A N/A N/A N/A N/A 2.801±1.24 N/A N/A N/A N/A N/A
ENSMUST00000079223 9.559±3.86 6.696±1.37 2.870±0.76 1.874±0.96 3.704±1.35 1.800±0.84 1.146±0.32 22.973±7.41 14.309±12.86 3.264±0.77 2.438±0.51 4.897±1.15 2.802±1.73 1.413±0.40
ENSMUST00000107091 N/A 4.418±0.00 N/A N/A 1.253±0.10 1.278±0.21 0.432±0.00 18.773±0.74 3.522±1.79 N/A N/A 2.285±0.56 N/A 0.969±0.22
ENSMUST00000125742 N/A N/A N/A N/A 2.991±0.00 2.175±0.00 1.623±0.00 N/A N/A N/A N/A 5.957±2.17 2.805±0.00 3.126±0.00
ENSMUST00000130541 N/A N/A N/A N/A N/A N/A 0.832±0.23 N/A N/A N/A N/A 3.929±0.00 N/A N/A
ENSMUST00000131654 N/A N/A N/A 4.495±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 1.811±0.00 N/A
ENSMUST00000134012 N/A N/A N/A 7.729±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 1.596±0.00 N/A
ENSMUST00000141248 1.161±0.00 N/A 0.849±0.00 0.338±0.06 0.924±0.04 N/A 0.225±0.01 N/A 1.920±0.97 0.562±0.00 0.357±0.00 1.543±0.00 0.140±0.00 0.444±0.04
ENSMUST00000142384 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000143742 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000147766 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000147783 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000150830 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000153119 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000156223 N/A 8.921±0.96 N/A N/A 7.606±1.97 2.201±0.20 N/A N/A N/A N/A N/A 5.646±0.00 N/A N/A
ENSMUST00000176162 N/A N/A N/A 0.219±0.04 N/A N/A N/A N/A N/A N/A 0.312±0.05 N/A N/A N/A
ENSMUST00000176840 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000177394 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000052684 ENSMUST00000107094 26.986±6.90 110.725±19.07 19.022±3.64 18.733±3.26 22.266±9.72 59.907±5.69 12.175±2.77 9.454±0.79 2.875±1.37 114.134±25.29 18.366±2.78 58.493±18.06 25.887±8.21 2.696±0.50
ENSMUSG00000084939 ENSMUST00000142458 0.054±0.03 0.049±0.02 0.042±0.00 0.009±0.00 0.288±0.16 0.828±0.16 0.133±0.04 0.041±0.03 0.069±0.08 0.843±0.23 0.232±0.05 0.502±0.30 0.008±0.00 0.015±0.00
ENSMUSG00000085377 ENSMUST00000156086 0.124±0.00 N/A 0.114±0.00 N/A 0.174±0.05 N/A N/A 0.054±0.00 0.013±0.00 0.204±0.10 N/A 0.096±0.02 0.081±0.02 0.509±0.19
ENSMUSG00000085835 ENSMUST00000155789 0.272±0.00 N/A N/A 0.138±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000093492 ENSMUST00000177219 N/A N/A 0.142±0.00 N/A N/A N/A 0.212±0.00 0.220±0.00 0.065±0.00 0.289±0.00 N/A N/A N/A 0.245±0.00
ENSMUSG00000100129 ENSMUST00000187014 0.054±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.106±0.00 N/A 0.059±0.03 0.008±0.00 N/A
ENSMUSG00000100189 ENSMUST00000191391 0.059±0.00 N/A 0.191±0.04 0.024±0.01 0.235±0.18 N/A N/A N/A N/A 0.073±0.01 0.291±0.11 0.075±0.00 0.081±0.03 N/A

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