C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: pleckstrin homology domain containing, family M (with RUN domain) member 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000225190 PLEKHM1 9606 - 17:45435900-45490749 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000430334 PLEKHM1-001 45435900-45490744 protein_coding
  ENST00000446609 PLEKHM1-004 45440163-45487858 nonsense_mediated_decay
  ENST00000579131 PLEKHM1-012 45437916-45441059 processed_transcript
  ENST00000579197 PLEKHM1-003 45435904-45490728 nonsense_mediated_decay
  ENST00000580205 PLEKHM1-006 45452938-45460432 processed_transcript
  ENST00000580404 PLEKHM1-008 45435903-45446273 processed_transcript
  ENST00000581448 PLEKHM1-002 45437471-45490729 nonsense_mediated_decay
  ENST00000581932 PLEKHM1-005 45477074-45482525 retained_intron
  ENST00000582035 PLEKHM1-007 45452938-45454771 retained_intron
  ENST00000582119 PLEKHM1-010 45468246-45487862 processed_transcript
  ENST00000583150 PLEKHM1-013 45439615-45448112 processed_transcript
  ENST00000584420 PLEKHM1-009 45475211-45490738 protein_coding
  ENST00000585506 PLEKHM1-019 45439514-45440373 retained_intron
  ENST00000586084 PLEKHM1-016 45475696-45490741 nonsense_mediated_decay
  ENST00000586562 PLEKHM1-014 45475597-45490749 processed_transcript
  ENST00000589780 PLEKHM1-015 45475366-45490741 protein_coding
  ENST00000590991 PLEKHM1-018 45439546-45445507 nonsense_mediated_decay
  ENST00000591580 PLEKHM1-017 45437549-45445533 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000430334ENST00000579197ENST00000580205ENST00000580404ENST00000581448ENST00000581932ENST00000582119ENST00000585506ENST00000586084
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000430334 3.623±0.00 1.889±0.00 N/A 1.470±0.44 3.493±0.91 1.308±0.36 1.851±0.00 1.554±0.00 0.888±0.37 2.924±1.28 3.067±0.00 2.291±0.62 2.255±0.62 1.461±0.09
ENST00000579197 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.789±0.00 0.537±0.00 N/A
ENST00000580205 N/A N/A N/A N/A N/A N/A N/A 0.562±0.00 N/A N/A N/A N/A N/A N/A
ENST00000580404 3.601±0.00 4.807±0.00 N/A N/A 6.114±0.00 3.871±0.00 2.280±0.00 3.673±0.00 2.612±0.00 5.045±0.00 3.898±0.00 4.701±1.67 2.765±1.09 1.186±0.00
ENST00000581448 N/A N/A 0.992±0.00 N/A N/A 0.861±0.00 N/A 1.005±0.00 N/A 1.847±0.00 2.612±0.00 2.143±0.00 N/A N/A
ENST00000581932 N/A N/A 1.786±0.00 1.498±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000582119 N/A N/A N/A N/A N/A N/A N/A N/A 4.052±0.00 N/A N/A N/A N/A N/A
ENST00000585506 N/A N/A N/A N/A N/A N/A N/A 3.787±0.00 N/A N/A N/A N/A N/A N/A
ENST00000586084 N/A N/A N/A N/A N/A N/A 1.492±0.00 N/A N/A N/A N/A 6.433±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004D9 CIL_0004D9_0002 CGP 17:45393902-45490749

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0005737 IEA cytoplasm
GO:0035556 IEA intracellular signal transduction
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000063247 plekhm1 pleckstrin homology domain containing, family M (with RUN domain) member 1 protein_coding Danio_rerio
ENSMUSG00000034247 Plekhm1 pleckstrin homology domain containing, family M (with RUN domain) member 1 protein_coding Mus_musculus

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