C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: PTPRD antisense RNA 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000225706 PTPRD-AS1 9606 + 9:8858130-8862255 lincRNA
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000430766 PTPRD-AS1-001 8858134-8861724 lincRNA
  ENST00000447950 PTPRD-AS1-002 8858130-8862255 lincRNA

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000430766ENST00000447950
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000430766 N/A N/A N/A 0.170±0.00 N/A 0.033±0.00 N/A 0.102±0.00 N/A N/A N/A N/A N/A 0.100±0.05
ENST00000447950 0.063±0.00 0.406±0.00 0.034±0.00 0.866±0.40 0.139±0.00 0.525±0.20 0.180±0.00 0.091±0.00 0.044±0.00 0.310±0.19 0.189±0.00 1.209±0.75 0.294±0.10 0.060±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003OT CIL_0003OT_0001 CGP 9:7796490-10612723
CIL_0005UW CIL_0005UW_0002 CGP 9:8314246-12710290
CIL_0007Z3 CIL_0007Z3_0001 VISTA 9:8436481-9038586

Gene Ontology
No GO terms available.

Homologs

No Homologs available.

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