C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: long intergenic non-protein coding RNA 343
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000226620 LINC00343 9606 + 13:105704280-105764440 processed_transcript
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000414368 LINC00343-011 105729501-105731708 retained_intron
  ENST00000415294 LINC00343-002 105707476-105764440 lincRNA
  ENST00000454555 LINC00343-001 105706645-105762100 lincRNA
  ENST00000596398 LINC00343-004 105705499-105707619 lincRNA
  ENST00000598229 LINC00343-008 105761329-105764242 lincRNA
  ENST00000598478 LINC00343-007 105706629-105707619 lincRNA
  ENST00000599179 LINC00343-006 105706099-105707618 lincRNA
  ENST00000599264 LINC00343-003 105706899-105718550 lincRNA
  ENST00000601607 LINC00343-005 105705922-105707618 lincRNA
  ENST00000608220 LINC00343-009 105718729-105731714 lincRNA
  ENST00000608426 LINC00343-012 105704280-105707611 lincRNA
  ENST00000608624 LINC00343-010 105726750-105731708 lincRNA

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainColonHeartLungMuscleTestisENST00000414368ENST00000454555ENST00000599264ENST00000601607ENST00000608220ENST00000608624
Transcript ID Adipose Brain Colon Heart Lung Muscle Testis
ENST00000414368 N/A 0.133±0.00 N/A N/A N/A N/A N/A
ENST00000454555 N/A 0.091±0.00 N/A N/A N/A 0.053±0.00 N/A
ENST00000599264 N/A 0.182±0.00 N/A N/A N/A N/A 6.687±1.80
ENST00000601607 N/A N/A 0.260±0.00 0.039±0.00 N/A N/A 3.509±0.00
ENST00000608220 0.081±0.00 N/A N/A N/A N/A N/A 4.652±0.00
ENST00000608624 N/A 0.146±0.07 N/A N/A 0.044±0.00 N/A 6.572±3.50

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00093N CIL_00093N_0001 VISTA 13:105669998-106273444

Gene Ontology
No GO terms available.

Homologs

No Homologs available.

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