C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00093N_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
mm688 VISTA 9606 13:105669998-106273444
GeneTranscriptPositionBiotype
ENSG00000222643 (AL603632.1)
 ENST00000410711 (AL603632.1-201) 106128371-106128488 miRNA
ENSG00000222682 (RNA5SP38)
RNA, 5S ribosomal pseudogene 38 		ENST00000410750 (RNA5SP38-201) 106155372-106155490 rRNA
ENSG00000226620 (LINC00343)
long intergenic non-protein coding RNA 343 		ENST00000414368 (LINC00343-011) 105729501-105731708 retained_intron
ENST00000415294 (LINC00343-002) 105707476-105764440 lincRNA
ENST00000454555 (LINC00343-001) 105706645-105762100 lincRNA
ENST00000596398 (LINC00343-004) 105705499-105707619 lincRNA
ENST00000598229 (LINC00343-008) 105761329-105764242 lincRNA
ENST00000598478 (LINC00343-007) 105706629-105707619 lincRNA
ENST00000599179 (LINC00343-006) 105706099-105707618 lincRNA
ENST00000599264 (LINC00343-003) 105706899-105718550 lincRNA
ENST00000601607 (LINC00343-005) 105705922-105707618 lincRNA
ENST00000608220 (LINC00343-009) 105718729-105731714 lincRNA
ENST00000608426 (LINC00343-012) 105704280-105707611 lincRNA
ENST00000608624 (LINC00343-010) 105726750-105731708 lincRNA
CIL_00093N_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
mm688 VISTA 10090 8:7802246-8404749
GeneTranscriptPositionBiotype
ENSMUSG00000099890 (RP24-87L12.1)
predicted gene 28262 		ENSMUST00000185463 (RP24-87L12.1-002) 7855847-7857912 lincRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeBrainColonHeartLungMusclePlacentaTestisCIL_00093N_0001ENSG00000222643ENST00000410711ENSG00000222682ENST00000410750ENSG00000226620ENST00000414368ENST00000415294ENST00000454555ENST00000596398ENST00000598229ENST00000598478ENST00000599179ENST00000599264ENST00000601607ENST00000608220ENST00000608426ENST00000608624CIL_00093N_0002ENSMUSG00000099890ENSMUST00000185463
Region; Gene Transcript'; AdiposeBrainColonHeartLungMusclePlacentaTestisCIL_00093N_0001ENSG00000222643ENST00000410711ENSG00000222682ENST00000410750ENSG00000226620ENST00000414368ENST00000454555ENST00000599264ENST00000601607ENST00000608220ENST00000608624CIL_00093N_0002ENSMUSG00000099890ENSMUST00000185463
Gene Transcript Adipose Brain Colon Heart Lung Muscle Placenta Testis
ENSG00000222643 ENST00000410711 N/A N/A 0.343±0.00 N/A N/A N/A N/A N/A
ENSG00000222682 ENST00000410750 N/A N/A 0.925±0.00 N/A N/A N/A N/A N/A
ENSG00000226620 ENST00000414368 N/A 0.133±0.00 N/A N/A N/A N/A N/A N/A
ENST00000415294 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000454555 N/A 0.091±0.00 N/A N/A N/A 0.053±0.00 N/A N/A
ENST00000596398 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000598229 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000598478 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000599179 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000599264 N/A 0.182±0.00 N/A N/A N/A N/A N/A 6.687±1.80
ENST00000601607 N/A N/A 0.260±0.00 0.039±0.00 N/A N/A N/A 3.509±0.00
ENST00000608220 0.081±0.00 N/A N/A N/A N/A N/A N/A 4.652±0.00
ENST00000608426 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000608624 N/A 0.146±0.07 N/A N/A 0.044±0.00 N/A N/A 6.572±3.50
Gene Transcript Adipose Brain Colon Heart Lung Muscle Placenta Testis
ENSMUSG00000099890 ENSMUST00000185463 N/A 0.164±0.00 N/A N/A N/A 0.095±0.00 0.320±0.00 0.132±0.07

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