C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000227544 AC018647.3 9606 + 7:35715034-35734887 lincRNA
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000430518 AC018647.3-004 35716490-35719534 lincRNA
  ENST00000432866 AC018647.3-003 35715034-35719695 lincRNA
  ENST00000449644 AC018647.3-001 35716474-35734887 lincRNA
  ENST00000458087 AC018647.3-002 35716486-35719712 lincRNA
  ENST00000585952 AC018647.3-005 35716802-35734515 lincRNA

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000430518ENST00000432866ENST00000449644ENST00000458087ENST00000585952
Transcript ID Adipose Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000430518 0.043±0.00 3.937±2.66 0.118±0.00 0.263±0.20 1.033±0.00 0.061±0.00 0.194±0.00 0.498±0.07 0.103±0.02 0.171±0.06 0.267±0.00 0.281±0.00
ENST00000432866 N/A N/A N/A 0.089±0.00 N/A 0.156±0.00 0.036±0.00 0.032±0.00 N/A 0.212±0.00 N/A N/A
ENST00000449644 N/A N/A 0.042±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000458087 N/A 3.306±0.28 N/A N/A 0.322±0.15 N/A N/A 0.212±0.00 N/A 0.196±0.00 0.332±0.17 0.606±0.17
ENST00000585952 0.075±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.029±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00091N CIL_00091N_0001 VISTA 7:35115190-35716608
CIL_0008SX CIL_0008SX_0001 VISTA 7:35118941-35719912
CIL_00091M CIL_00091M_0001 VISTA 7:35165574-35766732
CIL_00091L CIL_00091L_0001 VISTA 7:35251004-35852019
CIL_0005M2 CIL_0005M2_0001 CGP 7:35632659-35907105

Gene Ontology
No GO terms available.

Homologs

No Homologs available.

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