C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: LHX4 antisense RNA 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000230124 LHX4-AS1 9606 - 1:180269653-180502954 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000367595 LHX4-AS1-001 180288230-180502954 protein_coding
  ENST00000415414 LHX4-AS1-005 180269653-180274681 processed_transcript
  ENST00000440959 LHX4-AS1-004 180272602-180276224 processed_transcript
  ENST00000475338 LHX4-AS1-002 180286983-180413388 processed_transcript
  ENST00000496993 LHX4-AS1-003 180275380-180430262 processed_transcript
  ENST00000622400 LHX4-AS1-006 180273614-180274713 processed_transcript

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000367595ENST00000415414ENST00000440959ENST00000496993
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000367595 13.896±0.00 15.203±0.00 2.909±0.00 7.834±3.94 9.238±0.00 4.937±3.74 5.454±2.82 5.509±1.73 5.694±0.00 8.344±0.00 3.745±2.36 27.697±6.54 34.179±9.83 40.930±13.54
ENST00000415414 N/A 1.771±0.00 N/A N/A N/A N/A N/A 1.161±0.00 N/A N/A N/A 4.172±0.00 N/A N/A
ENST00000440959 N/A N/A 1.146±0.00 N/A N/A 0.887±0.00 N/A N/A 0.732±0.00 N/A N/A N/A N/A N/A
ENST00000496993 N/A 9.290±0.00 N/A 3.591±0.00 6.680±0.00 N/A N/A 6.967±0.00 N/A N/A N/A 26.992±0.00 9.442±0.00 11.847±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000062 IEA fatty-acyl-CoA binding
GO:0005515 IEA protein binding
GO:0005737 IEA cytoplasm
GO:0008289 IEA lipid binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000039456 acbd6 acyl-Coenzyme A binding domain containing 6 protein_coding Danio_rerio
ENSMUSG00000033701 Acbd6 acyl-Coenzyme A binding domain containing 6 protein_coding Mus_musculus

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