C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: acyl-Coenzyme A binding domain containing 6
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000033701 Acbd6 10090 + 1:155558120-155687233 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000035560 Acbd6-001 155558129-155687233 protein_coding
  ENSMUST00000080138 Acbd6-003 155558120-155572288 protein_coding
  ENSMUST00000097529 Acbd6-002 155558126-155587798 protein_coding
  ENSMUST00000159339 Acbd6-004 155567248-155572259 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000035560ENSMUST00000080138ENSMUST00000097529
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000035560 8.993±1.87 N/A 12.669±0.28 20.938±10.70 8.405±1.75 6.634±1.62 5.638±1.22 10.974±1.45 6.737±3.59 9.352±0.70 3.164±0.52 13.687±4.00 9.817±3.63 85.297±7.99
ENSMUST00000080138 22.508±7.23 103.478±14.57 26.332±7.68 21.470±9.63 44.513±30.35 46.650±3.35 11.460±5.71 27.282±9.76 19.668±5.83 30.510±13.67 21.424±2.18 70.988±29.03 13.606±4.18 N/A
ENSMUST00000097529 N/A N/A N/A N/A 1.317±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 22.218±3.74

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00065E CIL_00065E_0002 CGP 1:155275701-155687233
CIL_0006RD CIL_0006RD_0002 CGP 1:155558120-155751710

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000062 IEA fatty-acyl-CoA binding
GO:0003674 ND molecular_function
GO:0005737 IEA cytoplasm
GO:0008150 ND biological_process
GO:0008289 IEA lipid binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000039456 acbd6 acyl-Coenzyme A binding domain containing 6 protein_coding Danio_rerio
ENSG00000230124 LHX4-AS1 LHX4 antisense RNA 1 protein_coding Homo_sapiens

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