C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000232046 AC007392.3 9606 + 2:66574030-66730157 lincRNA
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000412944 AC007392.3-006 66691446-66730157 lincRNA
  ENST00000423168 AC007392.3-002 66689868-66695581 lincRNA
  ENST00000428590 AC007392.3-003 66691438-66715630 lincRNA
  ENST00000433396 AC007392.3-001 66574030-66695505 lincRNA
  ENST00000435389 AC007392.3-005 66691435-66695583 lincRNA

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartKidneyLiverLungMuscleOvaryTestisENST00000412944ENST00000423168ENST00000428590ENST00000433396ENST00000435389
Transcript ID Adipose Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Testis
ENST00000412944 N/A 0.066±0.00 N/A N/A N/A 0.081±0.00 0.798±0.00 N/A N/A N/A 0.178±0.00
ENST00000423168 N/A N/A N/A N/A N/A N/A N/A 0.591±0.00 N/A 0.391±0.00 0.602±0.00
ENST00000428590 0.087±0.00 0.061±0.00 0.350±0.00 N/A N/A 0.132±0.00 0.055±0.00 0.125±0.00 0.133±0.00 0.133±0.00 N/A
ENST00000433396 N/A N/A 0.220±0.00 0.264±0.00 0.069±0.00 0.083±0.00 0.073±0.00 N/A N/A 0.356±0.00 0.419±0.29
ENST00000435389 N/A N/A N/A 0.078±0.00 N/A N/A 0.788±0.00 N/A N/A 0.428±0.12 0.275±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00085V CIL_00085V_0001 VISTA 2:65983424-66584663
CIL_0007JR CIL_0007JR_0003 UCNEbase 2:66138106-68180953
CIL_0008VO CIL_0008VO_0001 VISTA 2:66222407-66823799
CIL_000949 CIL_000949_0001 VISTA 2:66235383-66837956
CIL_00094L CIL_00094L_0001 VISTA 2:66397571-66998983
CIL_0007XO CIL_0007XO_0001 VISTA 2:66524969-67125769

Gene Ontology
No GO terms available.

Homologs

No Homologs available.

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