C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: small nucleolar RNA host gene 15 (non-protein coding)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000232956 SNHG15 9606 - 7:44983023-44986961 lincRNA
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000438705 SNHG15-009 44983085-44986570 lincRNA
  ENST00000577700 SNHG15-002 44983023-44986637 lincRNA
  ENST00000578968 SNHG15-001 44983023-44986834 lincRNA
  ENST00000579383 SNHG15-007 44983026-44986656 lincRNA
  ENST00000580458 SNHG15-008 44983034-44986650 lincRNA
  ENST00000580528 SNHG15-003 44985462-44986961 lincRNA
  ENST00000582727 SNHG15-006 44983615-44986674 lincRNA
  ENST00000584327 SNHG15-010 44983137-44986560 lincRNA
  ENST00000584686 SNHG15-005 44983847-44986668 lincRNA
  ENST00000585030 SNHG15-004 44983026-44986669 lincRNA

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000438705ENST00000577700ENST00000578968ENST00000579383ENST00000580458ENST00000580528ENST00000582727ENST00000584327ENST00000584686ENST00000585030
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000438705 N/A N/A 0.286±0.00 0.823±0.00 N/A N/A N/A 0.559±0.00 N/A N/A N/A N/A 1.804±0.00 7.593±0.00
ENST00000577700 N/A N/A 0.100±0.00 N/A 0.639±0.00 N/A N/A 0.152±0.00 0.515±0.00 0.646±0.00 N/A 1.134±0.46 0.603±0.00 0.757±0.53
ENST00000578968 0.583±0.00 8.990±0.00 N/A 4.127±0.00 3.085±0.00 3.749±0.00 1.110±0.00 1.444±0.00 1.635±0.00 9.147±0.00 0.423±0.00 9.733±6.93 3.117±1.72 5.156±1.09
ENST00000579383 1.378±0.00 13.374±0.00 0.255±0.00 5.131±0.00 1.932±0.00 N/A N/A 4.161±0.00 0.864±0.00 9.141±0.00 0.969±0.00 N/A N/A N/A
ENST00000580458 1.774±0.00 N/A N/A 2.592±1.20 N/A 1.509±0.00 N/A N/A N/A N/A N/A 13.780±6.62 3.282±1.14 3.987±0.00
ENST00000580528 N/A N/A N/A N/A N/A N/A 0.151±0.00 N/A N/A N/A 0.187±0.00 N/A N/A N/A
ENST00000582727 N/A N/A N/A N/A N/A 0.621±0.00 0.339±0.00 0.965±0.00 0.566±0.00 N/A N/A N/A N/A 1.016±0.00
ENST00000584327 N/A N/A N/A 1.426±0.00 N/A N/A 0.651±0.00 3.619±0.00 N/A N/A N/A N/A N/A N/A
ENST00000584686 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.767±0.00 N/A N/A N/A
ENST00000585030 N/A N/A N/A N/A N/A N/A N/A N/A 0.796±0.00 N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000SD CIL_0000SD_0001 CGP 7:44962662-45076469

Gene Ontology

No GO terms available.

Homologs

No Homologs available.

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