C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000235142 RP1-60O19.1 9606 - 6:106717452-106787541 lincRNA
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000415714 RP1-60O19.1-001 106747085-106772293 lincRNA
  ENST00000418134 RP1-60O19.1-005 106724615-106740087 retained_intron
  ENST00000427903 RP1-60O19.1-007 106747250-106787435 lincRNA
  ENST00000428750 RP1-60O19.1-003 106717992-106787431 lincRNA
  ENST00000430094 RP1-60O19.1-006 106772118-106787479 lincRNA
  ENST00000433965 RP1-60O19.1-002 106747090-106787474 lincRNA
  ENST00000436659 RP1-60O19.1-004 106717452-106787425 lincRNA
  ENST00000602621 RP1-60O19.1-008 106717452-106746004 lincRNA
  ENST00000602934 RP1-60O19.1-009 106770126-106775004 lincRNA
  ENST00000606430 RP1-60O19.1-011 106754400-106787541 lincRNA
  ENST00000607090 RP1-60O19.1-010 106774461-106782467 lincRNA
  ENST00000607758 RP1-60O19.1-012 106735045-106739775 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000415714ENST00000427903ENST00000428750ENST00000430094ENST00000433965ENST00000436659ENST00000602621ENST00000602934ENST00000606430ENST00000607090
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000415714 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.254±0.00 N/A
ENST00000427903 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.045±0.00 N/A N/A
ENST00000428750 N/A N/A N/A N/A N/A 0.287±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000430094 N/A N/A N/A 0.064±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.046±0.00 N/A
ENST00000433965 N/A N/A N/A N/A N/A N/A N/A 11.868±0.00 19.371±0.00 N/A 0.089±0.00 0.236±0.00 0.143±0.00 0.049±0.00
ENST00000436659 N/A N/A N/A N/A N/A 0.089±0.00 N/A N/A N/A N/A N/A 0.031±0.00 N/A 0.043±0.01
ENST00000602621 N/A N/A 5.049±0.00 N/A 0.017±0.00 N/A N/A N/A 3.505±0.00 N/A N/A 0.017±0.00 N/A N/A
ENST00000602934 N/A 0.022±0.00 6.523±0.00 0.013±0.00 0.021±0.00 N/A 0.085±0.00 N/A 1.395±0.00 0.019±0.00 N/A 0.085±0.01 0.068±0.02 0.162±0.00
ENST00000606430 0.045±0.00 0.142±0.00 N/A 0.024±0.00 0.095±0.00 N/A N/A N/A N/A N/A N/A N/A 0.074±0.00 N/A
ENST00000607090 N/A N/A N/A N/A N/A N/A 0.051±0.00 N/A N/A N/A N/A 0.261±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008PN CIL_0008PN_0001 VISTA 6:106445731-107046322
CIL_00085F CIL_00085F_0001 VISTA 6:106472954-107074777

Gene Ontology
No GO terms available.

Homologs

No Homologs available.

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