C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: long intergenic non-protein coding RNA 494
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000235621 LINC00494 9606 + 20:48359950-48370629 lincRNA
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000416742 LINC00494-004 48359950-48370629 lincRNA
  ENST00000425021 LINC00494-001 48360012-48360904 lincRNA
  ENST00000433094 LINC00494-002 48365647-48370629 lincRNA
  ENST00000545181 LINC00494-201 48364889-48370629 lincRNA

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000416742ENST00000425021ENST00000433094ENST00000545181
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000416742 N/A N/A 0.176±0.00 N/A N/A N/A 0.013±0.00 N/A N/A 0.012±0.00 N/A N/A 1.322±0.00
ENST00000425021 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.270±0.00 N/A N/A N/A
ENST00000433094 0.027±0.00 N/A N/A 0.011±0.00 0.041±0.00 0.020±0.01 0.013±0.00 0.238±0.21 0.062±0.00 N/A 0.093±0.05 0.015±0.00 0.524±0.00
ENST00000545181 N/A 1.120±0.00 N/A N/A 0.039±0.00 0.075±0.00 N/A N/A 0.015±0.00 N/A 0.186±0.13 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00025A CIL_00025A_0001 CGP 20:47656348-48827883
CIL_0008NU CIL_0008NU_0001 VISTA 20:47854496-48458054
CIL_0008GE CIL_0008GE_0001 VISTA 20:48006569-48608425

Gene Ontology
No GO terms available.

Homologs

No Homologs available.

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