C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ring finger protein 148
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000235631 RNF148 9606 - 7:122701664-122702967 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000434824 RNF148-001 122701664-122702967 protein_coding
  ENST00000447240 RNF148-002 122701670-122702912 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000434824ENST00000447240
Transcript ID Adipose Bladder Brain Breast Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000434824 0.115±0.00 1.306±0.00 0.209±0.00 0.414±0.39 0.205±0.00 0.092±0.07 0.787±0.00 0.600±0.58 0.031±0.00 0.240±0.26 0.021±0.00 14.532±2.70
ENST00000447240 N/A N/A 0.054±0.00 0.012±0.00 0.025±0.00 N/A N/A N/A N/A 0.067±0.01 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003QO CIL_0003QO_0001 CGP 7:122301394-122886759
CIL_0001E7 CIL_0001E7_0001 CGP 7:122318425-122886759
CIL_0001E8 CIL_0001E8_0001 CGP 7:122697712-122702967
CIL_0001E9 CIL_0001E9_0001 CGP 7:122701664-122995700

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0008270 IEA zinc ion binding
GO:0016021 IEA integral component of membrane
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000016867 rnf128a ring finger protein 128a protein_coding Danio_rerio
ENSDARG00000029890 si:dkeyp-86f7.4 si:dkeyp-86f7.4 protein_coding Danio_rerio
ENSMUSG00000078179 Rnf148 ring finger protein 148 protein_coding Mus_musculus

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