C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ring finger protein 148
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000078179 Rnf148 10090 - 6:23653898-23655136 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000104979 Rnf148-001 23653898-23655136 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainColonHeartKidneyLiverLungOvaryTestisENSMUST00000104979
Transcript ID Bladder Brain Colon Heart Kidney Liver Lung Ovary Testis
ENSMUST00000104979 0.033±0.00 0.022±0.02 0.088±0.03 0.062±0.01 0.074±0.01 0.047±0.01 0.045±0.01 0.238±0.00 44.227±17.61

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003QO CIL_0003QO_0002 CGP 6:23245047-23839421
CIL_0001E7 CIL_0001E7_0002 CGP 6:23262773-23839421
CIL_0001E8 CIL_0001E8_0002 CGP 6:23648869-23655136
CIL_0001E9 CIL_0001E9_0002 CGP 6:23653898-23970060

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process
GO:0008270 IEA zinc ion binding
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000016867 rnf128a ring finger protein 128a protein_coding Danio_rerio
ENSDARG00000029890 si:dkeyp-86f7.4 si:dkeyp-86f7.4 protein_coding Danio_rerio
ENSG00000235631 RNF148 ring finger protein 148 protein_coding Homo_sapiens

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