C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: retinoid X receptor, beta
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000235712 RXRB 9606 - CHR_HSCHR6_MHC_MCF_CTG1:33363951-33371048 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000415668 RXRB-005 33365412-33366799 protein_coding
  ENST00000415909 RXRB-001 33363951-33371048 protein_coding
  ENST00000431161 RXRB-002 33363951-33370974 protein_coding
  ENST00000465169 RXRB-004 33364583-33370997 nonsense_mediated_decay
  ENST00000471999 RXRB-006 33365027-33365723 retained_intron
  ENST00000483648 RXRB-003 33366148-33368996 retained_intron

Expression Patterns

No expression data.

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000977 IDA RNA polymerase II regulatory region sequence-specific DNA binding
GO:0001228 IDA RNA polymerase II transcription regulatory region sequence-specific DNA binding transcription factor activity involved in positive regulation of transcription
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0003707 IEA steroid hormone receptor activity
GO:0003713 TAS transcription coactivator activity
GO:0004879 IDA ligand-activated sequence-specific DNA binding RNA polymerase II transcription factor activity
GO:0005515 IPI protein binding
GO:0005634 IEA nucleus
GO:0005654 TAS nucleoplasm
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0006367 TAS transcription initiation from RNA polymerase II promoter
GO:0008270 IEA zinc ion binding
GO:0010467 TAS gene expression
GO:0043401 IEA steroid hormone mediated signaling pathway
GO:0043565 IEA sequence-specific DNA binding
GO:0045944 IDA positive regulation of transcription from RNA polymerase II promoter

Homologs

No Homologs available.

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