C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: retinoid X receptor, beta
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000465169 RXRB-004 ENSG00000235712 9606 - CHR_HSCHR6_MHC_MCF_CTG1:33364583-33370997 nonsense_mediated_decay

Expression Patterns

No expression data.

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000116612 Rxrb-003 protein_coding Mus_musculus 0 1561
ENSMUST00000174299 Rxrb-010 protein_coding Mus_musculus 0 1561
ENSMUST00000173354 Rxrb-002 protein_coding Mus_musculus 0 1506
ENSMUST00000044858 Rxrb-001 protein_coding Mus_musculus 0 1506
ENSMUST00000174740 Rxrb-006 retained_intron Mus_musculus 0 723
ENSMUST00000166775 Rxra-201 protein_coding Mus_musculus 0 656
ENSMUST00000113934 Rxra-003 protein_coding Mus_musculus 0 656
ENSMUST00000100251 Rxra-002 protein_coding Mus_musculus 0 656
ENSMUST00000077257 Rxra-001 protein_coding Mus_musculus 0 656
ENSMUST00000174130 Rxrb-005 retained_intron Mus_musculus 0 549
ENSMUST00000174578 Rxrb-009 retained_intron Mus_musculus 0 507
ENSMUST00000173554 Rxrb-004 protein_coding Mus_musculus 0 481
ENSMUST00000174645 Rxrb-007 retained_intron Mus_musculus 0 460
ENSDART00000124173 rxraa-201 protein_coding Danio_rerio 0 451
ENSDART00000080481 rxraa-001 protein_coding Danio_rerio 0 451
ENSMUST00000174033 Rxrb-008 retained_intron Mus_musculus 0 322
ENSDART00000128914 rxrbb-201 protein_coding Danio_rerio 1e-35 156
ENSDART00000021596 rxrbb-001 protein_coding Danio_rerio 1e-35 156
ENSDART00000147844 rxrbb-002 retained_intron Danio_rerio 6e-28 130

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