C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Gene Info | |||||
|---|---|---|---|---|---|
| Description: | valine--tRNA ligase, mitochondrial isoform 3 | ||||
| Gene Accession | Gene Name | Tax ID | Strand | Position | Gene Biotype |
ENSG00000236178  |
VARSL | 9606 | + |
CHR_HSCHR6_MHC_COX_CTG1:30898107-30916176  |
protein_coding |
| Transcript Accession | Transcript Name | Position | Transcript Biotype | ||
| ENST00000383369 |
VARSL-001 | 30904070-30916176 | protein_coding | ||
| ENST00000416187 |
VARSL-008 | 30904247-30905281 | protein_coding | ||
| ENST00000431578 |
VARSL-006 | 30904117-30907656 | protein_coding | ||
| ENST00000462127 |
VARSL-003 | 30908511-30916176 | retained_intron | ||
| ENST00000462755 |
VARSL-005 | 30912925-30916176 | retained_intron | ||
| ENST00000464968 |
VARSL-011 | 30912300-30913222 | retained_intron | ||
| ENST00000469489 |
VARSL-002 | 30898107-30916176 | retained_intron | ||
| ENST00000470805 |
VARSL-007 | 30904131-30907663 | processed_transcript | ||
| ENST00000474247 |
VARSL-009 | 30906285-30907618 | retained_intron | ||
| ENST00000476604 |
VARSL-010 | 30911847-30915391 | processed_transcript | ||
| ENST00000492221 |
VARSL-004 | 30909543-30916176 | processed_transcript | ||
| ENST00000549900 |
VARSL-204 | 30904070-30916173 | protein_coding | ||
| ENST00000553245 |
VARSL-203 | 30904196-30916173 | protein_coding | ||
Expression PatternsNo expression data. |
Conserved Regions |
|---|
| Gene is not located within a conserved region. |
Gene Ontology |
||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0000166 | IEA | nucleotide binding |
| GO:0002161 | IEA | aminoacyl-tRNA editing activity |
| GO:0004812 | IEA | aminoacyl-tRNA ligase activity |
| GO:0004832 | IEA | valine-tRNA ligase activity |
| GO:0005524 | IEA | ATP binding |
| GO:0006418 | IEA | tRNA aminoacylation for protein translation |
| GO:0006438 | IEA | valyl-tRNA aminoacylation |
Homologs | |||||
| No Homologs available. | |||||
|---|---|---|---|---|---|
