C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: zinc finger, BED-type containing 5
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000236287 ZBED5 9606 - 11:10812074-10858796 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000413761 ZBED5-003 10852864-10858036 protein_coding
  ENST00000432999 ZBED5-001 10852704-10858073 protein_coding
  ENST00000525350 ZBED5-009 10812074-10856218 processed_transcript
  ENST00000526020 ZBED5-002 10854619-10858796 protein_coding
  ENST00000526852 ZBED5-008 10854668-10857819 protein_coding
  ENST00000528289 ZBED5-007 10854767-10858065 protein_coding
  ENST00000530570 ZBED5-005 10855658-10858065 processed_transcript
  ENST00000533903 ZBED5-010 10813006-10826582 processed_transcript
  ENST00000533925 ZBED5-004 10849897-10858073 processed_transcript
  ENST00000534690 ZBED5-006 10854737-10857637 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000413761ENST00000432999ENST00000525350ENST00000534690
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000413761 3.084±0.00 9.037±0.00 1.540±0.00 5.289±1.32 3.278±0.95 4.160±1.17 4.721±1.46 5.167±4.70 2.083±0.37 3.390±0.63 1.785±0.86 5.980±1.39 2.596±0.34 5.668±0.45
ENST00000432999 1.596±0.00 5.181±0.00 1.545±0.00 3.242±0.66 N/A N/A 2.275±0.00 3.031±0.00 1.466±0.00 2.089±0.68 0.990±0.00 5.676±3.09 1.500±0.22 4.613±0.00
ENST00000525350 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.258±0.00
ENST00000534690 N/A N/A N/A N/A N/A 5.807±0.00 N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0003677 IEA DNA binding
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000054233 FAM200A zinc finger, BED-type containing 5 protein_coding Danio_rerio
ENSMUSG00000034173 Zbed5 zinc finger, BED-type containing 5 protein_coding Mus_musculus

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