C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: zinc finger, BED-type containing 5
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000034173 Zbed5 10090 + 5:129895723-129903623 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000041466 Zbed5-001 129895723-129903623 protein_coding
  ENSMUST00000077320 Zbed5-002 129895778-129901825 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000041466ENSMUST00000077320
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000041466 1.115±0.66 0.501±0.39 0.689±0.02 3.388±1.19 0.761±0.23 0.425±0.18 0.205±0.04 0.312±0.09 0.543±0.31 0.546±0.11 0.148±0.08 3.340±0.81 2.355±1.47 1.805±0.51
ENSMUST00000077320 N/A 0.217±0.07 N/A N/A 0.393±0.01 0.266±0.13 0.153±0.07 0.170±0.00 0.247±0.06 N/A 0.175±0.00 0.858±0.08 N/A 3.307±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00072K CIL_00072K_0003 CGP 5:129846990-129898549
CIL_00072J CIL_00072J_0003 CGP 5:129863421-129898549

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0003676 IEA nucleic acid binding
GO:0005739 IDA mitochondrion
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000006874 BX664605.1 Uncharacterized protein protein_coding Danio_rerio
ENSG00000221909 FAM200A family with sequence similarity 200, member A protein_coding Homo_sapiens
ENSG00000236287 ZBED5 zinc finger, BED-type containing 5 protein_coding Homo_sapiens
ENSG00000237765 FAM200B family with sequence similarity 200, member B protein_coding Homo_sapiens

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