C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: nuclear pore complex interacting protein family, member B5
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000243716 NPIPB5 9606 + 16:22479121-22536521 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000356156 NPIPB5-018 22505845-22513834 protein_coding
  ENST00000357370 NPIPB5-201 22533600-22536432 protein_coding
  ENST00000415654 NPIPB5-016 22479121-22536513 processed_transcript
  ENST00000415833 NPIPB5-015 22490337-22534769 protein_coding
  ENST00000424340 NPIPB5-202 22513523-22536505 protein_coding
  ENST00000442450 NPIPB5-014 22531492-22533812 retained_intron
  ENST00000451409 NPIPB5-203 22513523-22536385 protein_coding
  ENST00000517347 NPIPB5-003 22513760-22527937 nonsense_mediated_decay
  ENST00000517539 NPIPB5-002 22513574-22536477 protein_coding
  ENST00000521555 NPIPB5-001 22513522-22536521 nonsense_mediated_decay
  ENST00000528249 NPIPB5-005 22513682-22534769 protein_coding
  ENST00000536620 NPIPB5-006 22513058-22513842 protein_coding
  ENST00000538509 NPIPB5-008 22513519-22516201 processed_transcript
  ENST00000538590 NPIPB5-023 22523843-22528107 retained_intron
  ENST00000538606 NPIPB5-010 22513523-22527787 protein_coding
  ENST00000539604 NPIPB5-024 22523883-22533725 nonsense_mediated_decay
  ENST00000539929 NPIPB5-021 22523523-22527880 retained_intron
  ENST00000540704 NPIPB5-012 22513564-22519235 processed_transcript
  ENST00000541154 NPIPB5-019 22507174-22523934 protein_coding
  ENST00000541664 NPIPB5-013 22513578-22533746 nonsense_mediated_decay
  ENST00000542518 NPIPB5-011 22513546-22523900 nonsense_mediated_decay
  ENST00000543407 NPIPB5-017 22504851-22527630 protein_coding
  ENST00000543997 NPIPB5-022 22523628-22532089 retained_intron
  ENST00000544308 NPIPB5-007 22513395-22520896 nonsense_mediated_decay
  ENST00000545375 NPIPB5-020 22507345-22523908 nonsense_mediated_decay
  ENST00000546168 NPIPB5-009 22490865-22514137 processed_transcript
  ENST00000621622 NPIPB5-204 22519967-22532881 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENST00000356156ENST00000357370ENST00000451409ENST00000517539ENST00000536620
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENST00000356156 N/A N/A N/A N/A N/A N/A 3.717±0.00 N/A N/A N/A N/A N/A N/A
ENST00000357370 14.761±0.00 44.988±0.00 N/A 15.976±0.00 30.749±0.00 14.771±0.00 5.350±0.00 10.372±7.09 7.350±0.00 45.947±0.00 14.749±0.00 21.559±0.00 N/A
ENST00000451409 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.427±0.00 N/A N/A
ENST00000517539 N/A 9.450±0.00 3.013±0.00 N/A N/A 2.740±0.00 N/A N/A N/A N/A N/A 5.914±0.85 1.375±0.00
ENST00000536620 N/A N/A N/A 11.117±0.00 34.772±0.00 22.631±0.00 8.837±0.00 7.492±0.00 27.489±0.00 31.785±0.00 4.513±0.00 15.025±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008RG CIL_0008RG_0001 VISTA 16:22372801-22973961

Gene Ontology
GO IDEvidence TypeGO Description
GO:0016021 IEA integral component of membrane

Homologs

No Homologs available.

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