C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: BDNF antisense RNA
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000245573 BDNF-AS 9606 + 11:27506838-27698174 antisense
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000499008 BDNF-AS-002 27506852-27677807 antisense
  ENST00000499568 BDNF-AS-007 27506852-27698174 antisense
  ENST00000500662 BDNF-AS-006 27506852-27698174 antisense
  ENST00000501176 BDNF-AS-001 27506852-27677807 antisense
  ENST00000501663 BDNF-AS-011 27665260-27677807 antisense
  ENST00000502161 BDNF-AS-005 27506852-27698174 antisense
  ENST00000530313 BDNF-AS-009 27639889-27659649 antisense
  ENST00000530686 BDNF-AS-008 27506838-27675978 antisense
  ENST00000532965 BDNF-AS-010 27506849-27658333 antisense

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000499008ENST00000499568ENST00000500662ENST00000501176ENST00000501663ENST00000530686ENST00000532965
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000499008 N/A 0.623±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.700±0.16
ENST00000499568 N/A N/A 1.258±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000500662 N/A N/A N/A 0.210±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000501176 N/A N/A 1.666±0.00 0.246±0.00 N/A N/A N/A N/A 0.687±0.00 N/A 0.356±0.20 0.682±0.00 N/A
ENST00000501663 0.088±0.00 N/A N/A 0.693±0.00 0.306±0.00 N/A 1.164±0.00 0.203±0.00 N/A N/A N/A N/A N/A
ENST00000530686 N/A N/A N/A 0.430±0.00 N/A 0.217±0.00 0.596±0.00 0.160±0.00 N/A 0.125±0.00 0.582±0.33 1.419±0.00 2.496±0.00
ENST00000532965 0.239±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00078E CIL_00078E_0002 CGP 11:27494576-27722058

Gene Ontology
No GO terms available.

Homologs

No Homologs available.

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