C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: OTX2 antisense RNA 1 (head to head)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000248550 OTX2-AS1 9606 + 14:56813183-57152177 lincRNA
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000534909 OTX2-AS1-001 56813183-56930833 lincRNA
  ENST00000554358 OTX2-AS1-003 56813291-56929039 lincRNA
  ENST00000554428 OTX2-AS1-004 56813233-56919792 lincRNA
  ENST00000554725 OTX2-AS1-002 56813271-57152177 lincRNA

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryTestisENST00000534909ENST00000554725
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Testis
ENST00000534909 0.165±0.00 0.277±0.00 0.244±0.00 0.226±0.00 0.119±0.00 0.022±0.00 0.111±0.00 0.050±0.00 0.118±0.00 0.080±0.00 0.016±0.00 0.207±0.00
ENST00000554725 N/A N/A N/A N/A N/A N/A 0.086±0.00 N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007P7 CIL_0007P7_0001 UCNEbase 14:56513836-57292417
CIL_00083W CIL_00083W_0001 VISTA 14:56553946-57157601
CIL_000869 CIL_000869_0001 VISTA 14:56652290-57254727
CIL_0009BX CIL_0009BX_0001 VISTA 14:56664169-57265628
CIL_000822 CIL_000822_0001 VISTA 14:56707426-57311372
CIL_0005ZZ CIL_0005ZZ_0002 CGP 14:56799905-57269008

Gene Ontology
No GO terms available.

Homologs

No Homologs available.

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