C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: cancer susceptibility candidate 16 (non-protein coding)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000249231 CASC16 9606 - 16:52552090-52652105 lincRNA
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000510238 CASC16-001 52552093-52606935 lincRNA
  ENST00000563844 CASC16-003 52573179-52652105 lincRNA
  ENST00000565755 CASC16-002 52552090-52554179 lincRNA

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainKidneyOvaryPlacentaTestisENST00000510238ENST00000565755
Transcript ID Brain Kidney Ovary Placenta Testis
ENST00000510238 N/A N/A N/A N/A 12.694±0.32
ENST00000565755 0.097±0.00 0.089±0.00 0.091±0.00 0.115±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007ON CIL_0007ON_0002 UCNEbase 16:51906374-55391377
CIL_0008J3 CIL_0008J3_0001 VISTA 16:52102343-52703464
CIL_00085C CIL_00085C_0001 VISTA 16:52112138-52713325
CIL_0008LS CIL_0008LS_0001 VISTA 16:52134617-52737850
CIL_0008J0 CIL_0008J0_0001 VISTA 16:52169922-52771014
CIL_0008J1 CIL_0008J1_0001 VISTA 16:52196629-52798059
CIL_000859 CIL_000859_0001 VISTA 16:52217685-52818923
CIL_0007WW CIL_0007WW_0001 VISTA 16:52223494-52824873
CIL_0008U8 CIL_0008U8_0001 VISTA 16:52406202-53010959
CIL_00077Q CIL_00077Q_0001 CGP 16:52438005-53329150

Gene Ontology

No GO terms available.

Homologs

No Homologs available.

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