C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: zinc finger protein 550
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000251369 ZNF550 9606 - 19:57535257-57559863 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000325134 ZNF550-201 57541840-57559863 protein_coding
  ENST00000344222 ZNF550-004 57542636-57547993 protein_coding
  ENST00000376230 ZNF550-002 57541840-57559863 nonsense_mediated_decay
  ENST00000447310 ZNF550-003 57541840-57559863 nonsense_mediated_decay
  ENST00000457177 ZNF550-001 57541836-57559863 protein_coding
  ENST00000506609 ZNF550-007 57546763-57556360 protein_coding
  ENST00000595560 ZNF550-005 57555998-57559860 retained_intron
  ENST00000601415 ZNF550-006 57535257-57559812 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000325134ENST00000344222ENST00000457177ENST00000506609
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000325134 N/A N/A N/A N/A 1.495±0.00 0.338±0.00 0.459±0.00 0.751±0.00 N/A N/A 0.684±0.00 N/A N/A N/A
ENST00000344222 0.290±0.00 N/A 0.330±0.00 0.696±0.00 0.650±0.00 0.565±0.00 N/A N/A N/A 0.798±0.00 0.312±0.00 0.668±0.23 0.363±0.02 0.825±0.00
ENST00000457177 1.038±0.00 1.026±0.00 N/A 1.353±0.52 0.877±0.00 0.713±0.00 0.411±0.00 0.324±0.00 N/A 0.885±0.17 N/A 1.681±0.15 0.665±0.15 2.102±0.09
ENST00000506609 N/A N/A N/A N/A N/A 0.697±0.00 N/A N/A 1.383±0.00 1.582±0.00 N/A N/A N/A N/A

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003676 IEA nucleic acid binding
GO:0003677 IEA DNA binding
GO:0005622 IEA intracellular
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated
GO:0046872 IEA metal ion binding

Homologs

No Homologs available.

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