C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: long intergenic non-protein coding RNA 958
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000251381 LINC00958 9606 - 11:12962510-12989548 lincRNA
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000504230 LINC00958-001 12979535-12989548 lincRNA
  ENST00000526388 LINC00958-004 12980669-12989538 lincRNA
  ENST00000527945 LINC00958-007 12962510-12989547 lincRNA
  ENST00000529328 LINC00958-002 12980487-12984292 lincRNA
  ENST00000531402 LINC00958-005 12980629-12989546 lincRNA
  ENST00000532541 LINC00958-006 12980038-12989537 lincRNA
  ENST00000534477 LINC00958-003 12980211-12989539 lincRNA

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000504230ENST00000526388ENST00000527945ENST00000529328ENST00000531402ENST00000532541ENST00000534477
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000504230 0.056±0.00 0.147±0.00 N/A 0.029±0.00 0.254±0.01 0.110±0.00 0.017±0.00 0.508±0.00 0.096±0.06 0.073±0.04 N/A 0.634±0.46 0.123±0.06 0.309±0.09
ENST00000526388 N/A 0.161±0.00 N/A N/A N/A N/A 0.025±0.00 N/A N/A 0.079±0.00 0.023±0.00 N/A N/A 0.880±0.00
ENST00000527945 N/A N/A N/A 0.129±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.402±0.16 N/A
ENST00000529328 N/A N/A N/A N/A 0.134±0.00 N/A N/A N/A N/A N/A N/A 1.517±1.14 0.204±0.00 0.475±0.00
ENST00000531402 N/A N/A N/A 0.118±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000532541 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.080±0.00 N/A 0.525±0.00 N/A N/A
ENST00000534477 0.063±0.00 N/A 3.506±0.00 N/A N/A N/A N/A N/A N/A 0.119±0.00 N/A 0.163±0.00 0.149±0.00 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008DD CIL_0008DD_0001 VISTA 11:12543785-13146999
CIL_0003PH CIL_0003PH_0001 CGP 11:12674591-13012106

Gene Ontology
No GO terms available.

Homologs

No Homologs available.

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