C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0008DD_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1314 VISTA 9606 11:12543785-13146999
GeneTranscriptPositionBiotype
ENSG00000187079 (TEAD1)
TEA domain family member 1 (SV40 transcriptional enhancer factor) 		ENST00000334310 (TEAD1-201) 12675503-12939065 protein_coding
ENST00000361985 (TEAD1-202) 12745041-12943945 protein_coding
ENST00000525312 (TEAD1-004) 12828121-12865539 retained_intron
ENST00000526600 (TEAD1-007) 12879443-12944483 protein_coding
ENST00000527376 (TEAD1-006) 12674617-12764437 protein_coding
ENST00000527575 (TEAD1-002) 12675503-12939065 protein_coding
ENST00000527636 (TEAD1-001) 12674591-12938034 protein_coding
ENSG00000189431 (RASSF10)
Ras association (RalGDS/AF-6) domain family (N-terminal) member 10 		ENST00000529419 (RASSF10-001) 13009577-13012106 protein_coding
ENSG00000203258 (RP11-47J17.2)
 ENST00000454086 (RP11-47J17.2-001) 12921186-12922925 antisense
ENSG00000251381 (LINC00958)
long intergenic non-protein coding RNA 958 		ENST00000504230 (LINC00958-001) 12979535-12989548 lincRNA
ENST00000526388 (LINC00958-004) 12980669-12989538 lincRNA
ENST00000527945 (LINC00958-007) 12962510-12989547 lincRNA
ENST00000529328 (LINC00958-002) 12980487-12984292 lincRNA
ENST00000531402 (LINC00958-005) 12980629-12989546 lincRNA
ENST00000532541 (LINC00958-006) 12980038-12989537 lincRNA
ENST00000534477 (LINC00958-003) 12980211-12989539 lincRNA
ENSG00000252329 (SCARNA16)
Small Cajal body specific RNA 16 		ENST00000516520 (SCARNA16.1-202) 12904817-12904988 snoRNA
ENSG00000254670 (CTC-497E21.3)
 ENST00000533002 (CTC-497E21.3-001) 13001090-13009159 lincRNA
ENSG00000254688 (RP11-47J17.3)
 ENST00000526953 (RP11-47J17.3-001) 12822435-12823667 antisense
ENSG00000255067 (RP11-47J17.1)
 ENST00000528792 (RP11-47J17.1-001) 12848795-12849433 sense_intronic
CIL_0008DD_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs1314 VISTA 10090 7:112524612-113127409
GeneTranscriptPositionBiotype
ENSMUSG00000030770 (Parva)
parvin, alpha 		ENSMUST00000033030 (Parva-001) 112427706-112591692 protein_coding
ENSMUST00000106640 (Parva-004) 112519701-112588970 protein_coding
ENSMUST00000106643 (Parva-002) 112427505-112589629 protein_coding
ENSMUST00000123185 (Parva-005) 112501177-112547610 processed_transcript
ENSMUST00000126047 (Parva-006) 112569250-112579659 processed_transcript
ENSMUST00000139720 (Parva-003) 112427905-112552929 nonsense_mediated_decay
ENSMUSG00000055320 (Tead1)
TEA domain family member 1 		ENSMUST00000059768 (Tead1-001) 112679320-112906807 protein_coding
ENSMUST00000069256 (Tead1-201) 112759384-112906805 protein_coding
ENSMUST00000084705 (Tead1-004) 112679318-112899459 protein_coding
ENSMUST00000106638 (Tead1-003) 112679357-112899990 protein_coding
ENSMUST00000163593 (Tead1-013) 112759387-112807068 processed_transcript
ENSMUST00000164363 (Tead1-002) 112742045-112898660 protein_coding
ENSMUST00000165036 (Tead1-008) 112759483-112898660 protein_coding
ENSMUST00000167060 (Tead1-011) 112759536-112861448 protein_coding
ENSMUST00000168328 (Tead1-010) 112759546-112842374 retained_intron
ENSMUST00000168981 (Tead1-006) 112759483-112898660 protein_coding
ENSMUST00000170352 (Tead1-005) 112759438-112898660 protein_coding
ENSMUST00000171197 (Tead1-007) 112759483-112898660 protein_coding
ENSMUST00000171373 (Tead1-012) 112691698-112759529 protein_coding
ENSMUST00000172065 (Tead1-009) 112679510-112842395 retained_intron
ENSMUSG00000085049 (Parvaos)
parvin, alpha, opposite strand 		ENSMUST00000154848 (Parvaos-001) 112526972-112535683 antisense
ENSMUSG00000085945 (2310014F06Rik)
RIKEN cDNA 2310014F06 gene 		ENSMUST00000146145 (2310014F06Rik-001) 112613468-112680058 processed_transcript
ENSMUSG00000088671 (Gm23662)
predicted gene, 23662 		ENSMUST00000158046 (Gm23662-201) 113119698-113119808 rRNA
ENSMUSG00000098132 (Rassf10)
Ras association (RalGDS/AF-6) domain family (N-terminal) member 10 		ENSMUST00000182858 (Rassf10-001) 112953962-112957457 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008DD_0001ENSG00000187079ENST00000334310ENST00000361985ENST00000525312ENST00000526600ENST00000527376ENST00000527575ENST00000527636ENSG00000189431ENST00000529419ENSG00000203258ENST00000454086ENSG00000251381ENST00000504230ENST00000526388ENST00000527945ENST00000529328ENST00000531402ENST00000532541ENST00000534477ENSG00000252329ENST00000516520ENSG00000254670ENST00000533002ENSG00000254688ENST00000526953ENSG00000255067ENST00000528792CIL_0008DD_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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0008DD_0001ENSG00000187079ENST00000334310ENST00000361985ENST00000526600ENST00000527575ENSG00000189431ENST00000529419ENSG00000203258ENST00000454086ENSG00000251381ENST00000504230ENST00000526388ENST00000527945ENST00000529328ENST00000531402ENST00000532541ENST00000534477ENSG00000252329ENST00000516520ENSG00000254670ENST00000533002ENSG00000254688ENST00000526953ENSG00000255067ENST00000528792CIL_0008DD_0002ENSMUSG00000030770ENSMUST00000033030ENSMUST00000106640ENSMUST00000106643ENSMUST00000139720ENSMUSG00000055320ENSMUST00000059768ENSMUST00000069256ENSMUST00000165036ENSMUST00000170352ENSMUST00000171197ENSMUSG00000085049ENSMUST00000154848ENSMUSG00000085945ENSMUST00000146145ENSMUSG00000088671ENSMUST00000158046ENSMUSG00000098132ENSMUST00000182858
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000187079 ENST00000334310 N/A N/A N/A N/A 4.247±0.00 N/A 3.120±0.00 N/A 5.762±0.00 N/A 4.281±0.00 N/A N/A N/A
ENST00000361985 N/A N/A N/A 0.288±0.00 N/A 0.832±0.00 1.352±0.00 1.641±0.00 5.032±0.00 0.943±0.00 6.145±0.00 N/A N/A N/A
ENST00000525312 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000526600 N/A N/A 2.310±0.00 N/A 3.065±0.00 N/A N/A N/A 3.539±0.00 1.364±0.00 N/A 1.407±0.00 2.652±0.00 1.335±0.00
ENST00000527376 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000527575 N/A N/A 2.747±0.00 0.714±0.00 N/A 3.015±0.00 N/A N/A N/A 4.135±0.00 N/A 5.420±0.00 N/A N/A
ENST00000527636 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000189431 ENST00000529419 0.089±0.00 1.331±0.00 1.396±0.00 0.286±0.11 1.096±0.99 0.090±0.05 0.171±0.04 2.433±0.00 0.151±0.00 0.313±0.00 0.244±0.00 1.493±1.64 0.087±0.05 0.782±0.22
ENSG00000203258 ENST00000454086 0.076±0.00 0.195±0.00 N/A 0.403±0.38 0.191±0.00 0.203±0.00 0.047±0.00 0.073±0.00 0.021±0.00 0.385±0.26 0.021±0.00 0.080±0.04 N/A 0.131±0.11
ENSG00000251381 ENST00000504230 0.056±0.00 0.147±0.00 N/A 0.029±0.00 0.254±0.01 0.110±0.00 0.017±0.00 0.508±0.00 0.096±0.06 0.073±0.04 N/A 0.634±0.46 0.123±0.06 0.309±0.09
ENST00000526388 N/A 0.161±0.00 N/A N/A N/A N/A 0.025±0.00 N/A N/A 0.079±0.00 0.023±0.00 N/A N/A 0.880±0.00
ENST00000527945 N/A N/A N/A 0.129±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.402±0.16 N/A
ENST00000529328 N/A N/A N/A N/A 0.134±0.00 N/A N/A N/A N/A N/A N/A 1.517±1.14 0.204±0.00 0.475±0.00
ENST00000531402 N/A N/A N/A 0.118±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000532541 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.080±0.00 N/A 0.525±0.00 N/A N/A
ENST00000534477 0.063±0.00 N/A 3.506±0.00 N/A N/A N/A N/A N/A N/A 0.119±0.00 N/A 0.163±0.00 0.149±0.00 N/A
ENSG00000252329 ENST00000516520 N/A N/A N/A N/A 6.736±0.00 5.748±0.00 0.194±0.00 N/A N/A N/A N/A 0.789±0.00 N/A 0.391±0.00
ENSG00000254670 ENST00000533002 N/A 0.071±0.00 0.389±0.00 N/A 0.037±0.00 N/A N/A 0.417±0.00 N/A 0.035±0.00 N/A 0.087±0.00 N/A N/A
ENSG00000254688 ENST00000526953 0.210±0.00 N/A N/A N/A N/A N/A 0.199±0.00 N/A N/A N/A N/A 0.395±0.30 N/A 0.033±0.00
ENSG00000255067 ENST00000528792 0.214±0.00 0.176±0.00 N/A 0.300±0.00 0.458±0.00 0.083±0.00 N/A 0.723±0.68 0.152±0.00 0.433±0.00 N/A 0.728±0.56 N/A 0.247±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000030770 ENSMUST00000033030 20.329±9.26 5.448±0.32 69.317±4.08 4.945±3.53 8.951±1.46 11.582±2.15 7.303±0.13 15.885±0.00 0.603±0.11 18.591±2.71 N/A 9.616±1.80 15.828±3.91 0.505±0.13
ENSMUST00000106640 14.399±0.92 5.011±0.00 N/A N/A 5.446±0.00 10.816±1.67 3.421±0.01 13.241±2.51 6.205±0.00 N/A N/A 11.599±2.02 29.793±20.54 1.318±0.24
ENSMUST00000106643 29.147±10.20 14.380±4.81 N/A 2.926±0.61 13.043±3.50 9.854±1.34 5.880±0.84 16.299±3.27 6.066±3.11 23.386±2.67 N/A 20.711±3.40 13.469±4.06 0.909±0.26
ENSMUST00000123185 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000126047 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000139720 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.157±0.00
ENSMUSG00000055320 ENSMUST00000059768 3.913±0.00 N/A 5.672±0.24 0.783±0.05 2.485±0.00 N/A 2.753±0.44 1.567±0.57 0.268±0.03 7.074±1.20 8.113±0.00 2.798±0.00 2.422±0.61 0.302±0.01
ENSMUST00000069256 1.996±0.71 12.314±2.26 9.683±3.41 5.333±4.82 3.647±1.75 5.400±2.73 6.765±1.97 4.199±1.44 0.700±0.38 17.586±6.86 5.447±1.90 6.398±4.57 5.052±1.99 0.361±0.23
ENSMUST00000084705 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000106638 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000163593 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000164363 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000165036 N/A N/A N/A N/A 7.057±0.00 N/A N/A N/A N/A N/A N/A N/A 9.093±0.00 N/A
ENSMUST00000167060 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000168328 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000168981 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000170352 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 8.545±0.00 N/A
ENSMUST00000171197 N/A 8.345±0.00 N/A N/A 6.596±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000171373 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000172065 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000085049 ENSMUST00000154848 0.168±0.05 0.085±0.00 0.265±0.00 0.092±0.03 0.143±0.07 0.221±0.00 0.030±0.00 0.032±0.00 0.037±0.03 0.164±0.08 0.053±0.01 0.186±0.09 0.052±0.02 0.026±0.01
ENSMUSG00000085945 ENSMUST00000146145 0.387±0.27 0.623±0.25 0.556±0.17 0.177±0.01 0.238±0.10 0.148±0.06 0.483±0.14 0.416±0.15 0.057±0.02 0.373±0.11 0.921±0.31 0.423±0.31 0.311±0.15 N/A
ENSMUSG00000088671 ENSMUST00000158046 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 19.372±0.00
ENSMUSG00000098132 ENSMUST00000182858 1.686±0.84 1.558±0.35 0.301±0.03 0.639±0.27 1.349±0.43 1.058±0.08 0.467±0.03 1.213±0.17 0.023±0.02 1.305±0.20 0.186±0.05 2.935±1.01 0.558±0.52 0.498±0.11

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