C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: Small Cajal body specific RNA 16
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000252329 SCARNA16 9606 - 11:12904817-12904988 snoRNA
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000516520 SCARNA16.1-202 12904817-12904988 snoRNA

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastColonHeartOvaryTestisENST00000516520
Transcript ID Breast Colon Heart Ovary Testis
ENST00000516520 6.736±0.00 5.748±0.00 0.194±0.00 0.789±0.00 0.391±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003PG CIL_0003PG_0001 CGP 11:12377185-12944483
CIL_0008DD CIL_0008DD_0001 VISTA 11:12543785-13146999
CIL_0003PH CIL_0003PH_0001 CGP 11:12674591-13012106
CIL_0007PM CIL_0007PM_0001 UCNEbase 11:12832659-12944704

Gene Ontology
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000085338 SCARNA16 Small Cajal body specific RNA 16 snoRNA Danio_rerio
ENSMUSG00000088903 Gm25434 predicted gene, 25434 snoRNA Mus_musculus

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