C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: retrotransposon-like 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000254656 RTL1 9606 - 14:100880655-100884847 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000534062 RTL1-001 100880655-100884847 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000534062
Transcript ID Adrenal Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000534062 0.006±0.00 0.345±0.25 0.139±0.13 0.157±0.12 0.084±0.00 0.118±0.08 0.183±0.00 0.070±0.00 0.725±0.67 2.305±0.84 0.283±0.03

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007Q7 CIL_0007Q7_0001 VISTA 14:100481347-101081347
CIL_00032N CIL_00032N_0001 CGP 14:100725705-100884847
CIL_0004AB CIL_0004AB_0001 CGP 14:100880655-101563452

Gene Ontology
GO IDEvidence TypeGO Description
GO:0007275 IEA multicellular organismal development
GO:0016021 IEA integral component of membrane

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000085925 Rtl1 retrotransposon-like 1 protein_coding Mus_musculus

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