C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: T cell receptor alpha variable 1-2
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000256553 TRAV1-2 9606 + 14:21642889-21643578 TR_V_gene
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000390423 TRAV1-2-001 21642889-21643578 TR_V_gene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastColonHeartKidneyLungOvaryTestisENST00000390423
Transcript ID Adrenal Breast Colon Heart Kidney Lung Ovary Testis
ENST00000390423 0.459±0.00 0.213±0.00 0.116±0.00 0.038±0.00 0.167±0.00 0.125±0.03 0.190±0.03 0.172±0.06

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008CX CIL_0008CX_0001 VISTA 14:21403052-22005074
CIL_0003NS CIL_0003NS_0001 CGP 14:21633836-21666024

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSMUSG00000076758 Trav1 T cell receptor alpha variable 1 TR_V_gene Mus_musculus

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