C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: glutamyl-tRNA(Gln) amidotransferase, subunit C
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000257218 GATC 9606 + 12:120446438-120463749 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000229384 GATC-006 120446577-120459921 protein_coding
  ENST00000548171 GATC-005 120446444-120460344 nonsense_mediated_decay
  ENST00000551765 GATC-001 120446438-120463749 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryENST00000548171ENST00000551765
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary
ENST00000548171 N/A N/A N/A N/A N/A 1.603±0.00 N/A N/A N/A 3.391±0.00 N/A
ENST00000551765 3.046±0.00 0.745±0.00 3.100±1.04 2.301±0.43 2.801±1.20 0.898±0.58 1.502±0.00 1.291±0.00 0.860±0.00 0.884±0.56 2.337±0.61

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009CQ CIL_0009CQ_0001 VISTA 12:119991644-120595694
CIL_0007ZA CIL_0007ZA_0001 VISTA 12:120240385-120840841
CIL_0002ZM CIL_0002ZM_0001 CGP 12:120438198-120460006

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005524 IEA ATP binding
GO:0005739 IDA mitochondrion
GO:0006450 IEA regulation of translational fidelity
GO:0030956 IDA glutamyl-tRNA(Gln) amidotransferase complex
GO:0032543 IMP mitochondrial translation
GO:0050567 IDA glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity
GO:0070681 IDA glutaminyl-tRNAGln biosynthesis via transamidation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000056855 GATC glutamyl-tRNA(Gln) amidotransferase, subunit C protein_coding Danio_rerio

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