C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: glutamyl-tRNA(Gln) amidotransferase, subunit C
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000551765 GATC-001 ENSG00000257218 9606 + 12:120446438-120463749 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryENST00000551765
Transcript ID Adipose Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary
ENST00000551765 3.046±0.00 0.745±0.00 3.100±1.04 2.301±0.43 2.801±1.20 0.898±0.58 1.502±0.00 1.291±0.00 0.860±0.00 0.884±0.56 2.337±0.61

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009CQ CIL_0009CQ_0001 VISTA 12:119991644-120595694
CIL_0007ZA CIL_0007ZA_0001 VISTA 12:120240385-120840841
CIL_0002ZM CIL_0002ZM_0001 CGP 12:120438198-120460006

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005524 IEA ATP binding
GO:0005739 IDA mitochondrion
GO:0006450 IEA regulation of translational fidelity
GO:0030956 IDA glutamyl-tRNA(Gln) amidotransferase complex
GO:0032543 IMP mitochondrial translation
GO:0050567 IDA glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity
GO:0070681 IDA glutaminyl-tRNAGln biosynthesis via transamidation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000149510 Srsf9-004 protein_coding Mus_musculus 0 274
ENSMUST00000144000 Srsf9-002 processed_transcript Mus_musculus 0 274
ENSMUST00000031513 Srsf9-001 protein_coding Mus_musculus 0 274
ENSMUST00000142318 Srsf9-003 processed_transcript Mus_musculus 6e-26 124

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