C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: long intergenic non-protein coding RNA 520
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000258791 LINC00520 9606 - 14:55781135-55796688 lincRNA
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000554186 LINC00520-001 55792725-55796639 lincRNA
  ENST00000554196 LINC00520-004 55787927-55793360 lincRNA
  ENST00000554221 LINC00520-003 55782409-55796688 lincRNA
  ENST00000556417 LINC00520-002 55782426-55796674 lincRNA
  ENST00000560267 LINC00520-005 55781135-55796656 lincRNA
  ENST00000560336 LINC00520-006 55782067-55796688 lincRNA

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000554186ENST00000554196ENST00000554221ENST00000556417ENST00000560267ENST00000560336
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000554186 N/A N/A N/A N/A 0.280±0.00 N/A N/A N/A N/A N/A 0.035±0.00 N/A N/A
ENST00000554196 0.099±0.00 0.130±0.00 0.342±0.00 0.025±0.00 0.047±0.00 0.268±0.00 0.363±0.00 N/A 0.100±0.00 0.190±0.00 0.209±0.02 N/A 0.139±0.00
ENST00000554221 N/A 0.245±0.00 0.082±0.00 N/A 0.037±0.00 N/A N/A N/A N/A N/A 0.413±0.30 0.030±0.00 0.036±0.00
ENST00000556417 N/A N/A N/A N/A N/A N/A N/A 0.030±0.00 N/A N/A N/A N/A N/A
ENST00000560267 N/A N/A N/A 0.234±0.00 N/A N/A N/A N/A 0.198±0.00 N/A 0.798±0.00 0.172±0.00 N/A
ENST00000560336 N/A N/A N/A N/A N/A 0.025±0.00 N/A N/A N/A N/A 0.323±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000604 CIL_000604_0002 CGP 14:55559072-56301526

Gene Ontology
No GO terms available.

Homologs

No Homologs available.

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