C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: mitochondrial ribosomal protein L46
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000259494 MRPL46 9606 - 15:88459476-88467419 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000312475 MRPL46-001 88459476-88467419 protein_coding
  ENST00000558531 MRPL46-005 88465013-88467390 protein_coding
  ENST00000558660 MRPL46-002 88459477-88465747 retained_intron
  ENST00000559538 MRPL46-003 88459478-88464813 nonsense_mediated_decay
  ENST00000560703 MRPL46-004 88459608-88467389 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000312475ENST00000558531ENST00000558660ENST00000560703
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000312475 9.529±0.00 12.321±0.00 1.824±0.00 9.141±3.49 10.093±8.72 6.675±4.99 18.376±15.81 12.693±5.50 13.743±11.42 3.815±2.09 8.288±0.72 14.225±7.92 23.846±6.62 25.836±7.48
ENST00000558531 N/A N/A N/A N/A N/A 1.814±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000558660 N/A N/A 0.393±0.00 0.395±0.00 N/A N/A 0.184±0.00 0.391±0.00 0.287±0.00 0.108±0.00 N/A 0.262±0.00 N/A N/A
ENST00000560703 N/A N/A N/A N/A N/A N/A N/A 12.052±0.00 9.864±0.00 N/A 5.188±0.00 N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001AZ CIL_0001AZ_0001 CGP 15:87859751-88467419
CIL_00011G CIL_00011G_0001 CGP 15:88459476-88480773

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0005739 IEA mitochondrion
GO:0005840 IEA ribosome
GO:0008150 ND biological_process
GO:0008152 IEA metabolic process
GO:0016787 IEA hydrolase activity

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000016307 mrpl46 mitochondrial ribosomal protein L46 protein_coding Danio_rerio
ENSMUSG00000030612 Mrpl46 mitochondrial ribosomal protein L46 protein_coding Mus_musculus

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