C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description:
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000260963 RP11-297L17.2 9606 + 16:52607349-52613908 lincRNA
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000564361 RP11-297L17.2-003 52607473-52611059 lincRNA
  ENST00000565153 RP11-297L17.2-001 52607349-52613894 lincRNA
  ENST00000566645 RP11-297L17.2-002 52612455-52613908 lincRNA

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderKidneyLiverOvaryTestisENST00000564361ENST00000565153ENST00000566645
Transcript ID Bladder Kidney Liver Ovary Testis
ENST00000564361 N/A N/A N/A N/A 0.615±0.21
ENST00000565153 N/A N/A N/A 0.284±0.00 0.555±0.24
ENST00000566645 1.785±0.00 1.407±0.67 0.894±0.00 1.186±0.00 0.475±0.05

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007ON CIL_0007ON_0002 UCNEbase 16:51906374-55391377
CIL_0008J3 CIL_0008J3_0001 VISTA 16:52102343-52703464
CIL_00085C CIL_00085C_0001 VISTA 16:52112138-52713325
CIL_0008LS CIL_0008LS_0001 VISTA 16:52134617-52737850
CIL_0008J0 CIL_0008J0_0001 VISTA 16:52169922-52771014
CIL_0008J1 CIL_0008J1_0001 VISTA 16:52196629-52798059
CIL_000859 CIL_000859_0001 VISTA 16:52217685-52818923
CIL_0007WW CIL_0007WW_0001 VISTA 16:52223494-52824873
CIL_0008U8 CIL_0008U8_0001 VISTA 16:52406202-53010959
CIL_00077Q CIL_00077Q_0001 CGP 16:52438005-53329150

Gene Ontology
No GO terms available.

Homologs

No Homologs available.

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