C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: block of proliferation 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000261236 BOP1 9606 - 8:144262102-144291370 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000563210 BOP1-004 144264934-144266086 processed_transcript
  ENST00000568812 BOP1-006 144262616-144263557 retained_intron
  ENST00000569160 BOP1-005 144264544-144265459 retained_intron
  ENST00000569403 BOP1-003 144264342-144291370 protein_coding
  ENST00000569669 BOP1-001 144262102-144291370 protein_coding
  ENST00000569712 BOP1-002 144281684-144291367 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000563210ENST00000569403ENST00000569669
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000563210 N/A N/A N/A N/A 2.144±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000569403 6.954±0.00 N/A N/A 8.297±0.00 7.041±0.00 N/A 0.419±0.00 0.569±0.00 N/A N/A N/A N/A N/A 15.673±0.00
ENST00000569669 9.869±0.00 22.410±0.00 0.422±0.00 6.331±3.38 8.279±6.19 15.078±0.00 3.618±3.49 4.519±3.74 10.261±0.00 4.742±3.93 38.041±37.64 28.094±21.36 16.219±2.00 26.078±0.62

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007SS CIL_0007SS_0001 VISTA 8:143880613-144482307
CIL_00026T CIL_00026T_0001 CGP 8:144148016-144291370
CIL_0006M5 CIL_0006M5_0002 CGP 8:144262102-144291370

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000448 IEA cleavage in ITS2 between 5.8S rRNA and LSU-rRNA of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0000463 IMP maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0005515 IPI:IEA protein binding
GO:0005730 IEA nucleolus
GO:0006364 IEA rRNA processing
GO:0008283 NAS cell proliferation
GO:0030529 IDA ribonucleoprotein complex
GO:0030687 IEA preribosome, large subunit precursor
GO:0042254 NAS ribosome biogenesis
GO:0042273 IEA ribosomal large subunit biogenesis
GO:0043021 IEA ribonucleoprotein complex binding
GO:0044822 IDA poly(A) RNA binding
GO:0051726 IMP regulation of cell cycle
GO:0070545 IDA PeBoW complex

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000063627 bop1 block of proliferation 1 protein_coding Danio_rerio
ENSMUSG00000022557 Bop1 block of proliferation 1 protein_coding Mus_musculus

Loading