C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: haptoglobin-related protein
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000261701 HPR 9606 + 16:72063224-72077246 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000356967 HPR-201 72063229-72077245 protein_coding
  ENST00000540303 HPR-001 72063224-72077246 protein_coding
  ENST00000561690 HPR-002 72063229-72077246 protein_coding
  ENST00000566168 HPR-003 72063226-72074751 retained_intron

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLungOvaryPlacentaTestisENST00000356967ENST00000540303ENST00000561690ENST00000566168
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Lung Ovary Placenta Testis
ENST00000356967 0.043±0.00 0.468±0.00 2.088±0.00 0.110±0.00 0.197±0.12 12.417±0.00 2.180±0.00 0.253±0.00 0.183±0.09 0.078±0.02 0.842±0.00
ENST00000540303 N/A N/A 0.722±0.29 0.115±0.00 N/A 13.349±0.00 26.651±0.00 N/A 0.133±0.05 0.145±0.00 0.418±0.00
ENST00000561690 0.024±0.00 N/A N/A 0.258±0.00 N/A N/A 40.697±0.00 N/A N/A N/A 0.166±0.00
ENST00000566168 N/A N/A N/A 0.241±0.00 N/A N/A N/A 0.229±0.00 N/A 0.063±0.00 0.479±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00098E CIL_00098E_0001 VISTA 16:71920667-72521926
CIL_00098B CIL_00098B_0001 VISTA 16:71941307-72542883
CIL_0002Q2 CIL_0002Q2_0001 CGP 16:72044289-72094431

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003824 IEA catalytic activity
GO:0004252 IEA serine-type endopeptidase activity
GO:0005576 TAS:IEA extracellular region
GO:0006508 IEA proteolysis
GO:0030492 NAS:IEA hemoglobin binding
GO:0034366 IDA spherical high-density lipoprotein particle
GO:0070062 IDA extracellular vesicular exosome
GO:0072562 IDA blood microparticle

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000051890 hp haptoglobin protein_coding Danio_rerio
ENSMUSG00000031722 Hp haptoglobin protein_coding Mus_musculus

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