C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002Q2_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000140830-ENSG00000140830 CGP 9606 16:72044289-72094431
GeneTranscriptPositionBiotype
ENSG00000140829 (DHX38)
DEAH (Asp-Glu-Ala-His) box polypeptide 38 		ENST00000268482 (DHX38-001) 72093562-72112912 protein_coding
ENST00000562774 (DHX38-017) 72104486-72112908 protein_coding
ENST00000563650 (DHX38-009) 72097160-72099888 retained_intron
ENST00000563819 (DHX38-015) 72108296-72112639 protein_coding
ENST00000564307 (DHX38-010) 72096927-72099826 retained_intron
ENST00000564622 (DHX38-014) 72108297-72108878 retained_intron
ENST00000566329 (DHX38-018) 72101082-72103921 retained_intron
ENST00000566489 (DHX38-008) 72093924-72096867 protein_coding
ENST00000566794 (DHX38-007) 72093613-72096912 protein_coding
ENST00000567142 (DHX38-016) 72108372-72112909 protein_coding
ENST00000567552 (DHX38-011) 72108354-72112650 retained_intron
ENST00000569935 (DHX38-012) 72103101-72104554 retained_intron
ENST00000569952 (DHX38-013) 72108630-72109756 retained_intron
ENST00000579387 (DHX38-002) 72093847-72112903 nonsense_mediated_decay
ENSG00000140830 (TXNL4B)
thioredoxin-like 4B 		ENST00000268483 (TXNL4B-001) 72084853-72093651 protein_coding
ENST00000423037 (TXNL4B-201) 72084859-72093869 protein_coding
ENST00000426362 (TXNL4B-003) 72086397-72094431 protein_coding
ENST00000562153 (TXNL4B-002) 72044289-72093557 protein_coding
ENST00000565171 (TXNL4B-004) 72086715-72093552 nonsense_mediated_decay
ENST00000569767 (TXNL4B-005) 72088987-72093869 protein_coding
ENSG00000257017 (HP)
haptoglobin 		ENST00000228226 (HP-201) 72054609-72060890 protein_coding
ENST00000355906 (HP-002) 72054595-72061054 protein_coding
ENST00000357763 (HP-012) 72054626-72061016 protein_coding
ENST00000398131 (HP-202) 72054609-72061054 protein_coding
ENST00000561927 (HP-017) 72056161-72058028 retained_intron
ENST00000562488 (HP-010) 72054623-72058509 retained_intron
ENST00000562526 (HP-015) 72054626-72061055 protein_coding
ENST00000564499 (HP-014) 72054626-72060634 protein_coding
ENST00000565574 (HP-003) 72054629-72061009 protein_coding
ENST00000565807 (HP-008) 72054623-72057346 retained_intron
ENST00000566821 (HP-006) 72054626-72061054 retained_intron
ENST00000567185 (HP-016) 72056161-72060928 protein_coding
ENST00000567612 (HP-009) 72056161-72061026 protein_coding
ENST00000568417 (HP-018) 72054638-72059188 protein_coding
ENST00000569639 (HP-011) 72054623-72059461 protein_coding
ENST00000570083 (HP-001) 72054592-72061055 protein_coding
ENST00000576168 (HP-019) 72056161-72059818 protein_coding
ENST00000613898 (HP-203) 72054626-72061054 protein_coding
ENSG00000261701 (HPR)
haptoglobin-related protein 		ENST00000356967 (HPR-201) 72063229-72077245 protein_coding
ENST00000540303 (HPR-001) 72063224-72077246 protein_coding
ENST00000561690 (HPR-002) 72063229-72077246 protein_coding
ENST00000566168 (HPR-003) 72063226-72074751 retained_intron

Homo sapiens Ensembl (GRCh38)

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CIL_0002Q2_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000031723-ENSMUSG00000031722 CGP 10090 8:109565892-109579172
GeneTranscriptPositionBiotype
ENSMUSG00000031722 (Hp)
haptoglobin 		ENSMUST00000074898 (Hp-201) 109575130-109579172 protein_coding
ENSMUSG00000031723 (Txnl4b)
thioredoxin-like 4B 		ENSMUST00000034159 (Txnl4b-001) 109565892-109574051 protein_coding
ENSMUST00000178445 (Txnl4b-201) 109568888-109573523 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002Q2_0001ENSG00000140829ENST00000268482ENST00000562774ENST00000563650ENST00000563819ENST00000564307ENST00000564622ENST00000566329ENST00000566489ENST00000566794ENST00000567142ENST00000567552ENST00000569935ENST00000569952ENST00000579387ENSG00000140830ENST00000268483ENST00000423037ENST00000426362ENST00000562153ENST00000565171ENST00000569767ENSG00000257017ENST00000228226ENST00000355906ENST00000357763ENST00000398131ENST00000561927ENST00000562488ENST00000562526ENST00000564499ENST00000565574ENST00000565807ENST00000566821ENST00000567185ENST00000567612ENST00000568417ENST00000569639ENST00000570083ENST00000576168ENST00000613898ENSG00000261701ENST00000356967ENST00000540303ENST00000561690ENST00000566168CIL_0002Q2_0002ENSMUSG00000031722ENSMUST00000074898ENSMUSG00000031723ENSMUST00000034159ENSMUST00000178445
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002Q2_0001ENSG00000140829ENST00000268482ENST00000563650ENST00000566489ENST00000566794ENST00000567142ENST00000579387ENSG00000140830ENST00000268483ENST00000562153ENSG00000257017ENST00000228226ENST00000355906ENST00000561927ENST00000562488ENST00000562526ENST00000565574ENST00000566821ENST00000567185ENST00000567612ENST00000613898ENSG00000261701ENST00000356967ENST00000540303ENST00000561690ENST00000566168CIL_0002Q2_0002ENSMUSG00000031722ENSMUST00000074898ENSMUSG00000031723ENSMUST00000034159ENSMUST00000178445
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000140829 ENST00000268482 9.038±0.00 N/A 0.809±0.00 12.155±0.00 4.567±2.78 4.446±0.00 2.890±1.38 N/A N/A 4.270±0.00 4.989±0.00 7.569±4.22 N/A 15.941±0.18
ENST00000562774 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000563650 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.185±0.00 N/A N/A N/A
ENST00000563819 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000564307 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000564622 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000566329 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000566489 N/A N/A 9.021±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000566794 N/A N/A N/A N/A N/A 9.450±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000567142 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 17.850±0.00 15.291±0.00 N/A
ENST00000567552 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000569935 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000569952 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000579387 N/A N/A N/A 1.504±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000140830 ENST00000268483 N/A 7.343±0.00 1.262±0.00 4.311±1.97 2.463±0.00 4.145±0.00 2.904±0.00 3.774±0.75 3.015±0.00 2.925±0.00 1.721±0.00 3.330±1.12 2.778±0.71 9.755±0.00
ENST00000423037 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000426362 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000562153 N/A N/A N/A N/A N/A N/A N/A 12.934±0.00 N/A N/A N/A N/A N/A N/A
ENST00000565171 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000569767 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000257017 ENST00000228226 3.735±0.00 36.421±0.00 N/A 0.203±0.00 1.905±0.00 2.158±0.00 4.101±0.00 22.452±0.00 N/A 34.333±0.00 0.705±0.54 0.627±0.00 0.241±0.00 11.135±0.00
ENST00000355906 N/A N/A N/A N/A 3.771±0.00 N/A N/A 983.892±0.00 N/A N/A N/A N/A N/A N/A
ENST00000357763 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000398131 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000561927 N/A N/A N/A 0.319±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000562488 N/A N/A 0.302±0.00 N/A N/A N/A 0.616±0.00 N/A N/A N/A N/A N/A 0.112±0.00 N/A
ENST00000562526 N/A N/A N/A 0.288±0.00 N/A N/A N/A N/A N/A N/A 0.414±0.00 N/A 0.111±0.00 N/A
ENST00000564499 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000565574 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.339±0.00 N/A
ENST00000565807 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000566821 N/A N/A 0.234±0.00 0.077±0.02 N/A 0.188±0.00 0.275±0.19 N/A 0.302±0.00 N/A N/A 0.016±0.00 N/A N/A
ENST00000567185 1.450±0.00 N/A N/A N/A N/A 0.616±0.00 N/A N/A N/A N/A N/A 1.136±1.34 0.189±0.00 1.088±0.58
ENST00000567612 N/A N/A N/A 0.256±0.00 3.807±0.00 0.890±0.00 0.729±0.00 772.336±768.51 0.478±0.00 6.664±2.48 0.924±0.00 0.723±0.50 N/A 4.604±0.00
ENST00000568417 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000569639 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000570083 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000576168 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000613898 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.224±0.00 0.372±0.20 N/A
ENSG00000261701 ENST00000356967 0.043±0.00 0.468±0.00 N/A 2.088±0.00 0.110±0.00 0.197±0.12 12.417±0.00 2.180±0.00 N/A 0.253±0.00 N/A 0.183±0.09 0.078±0.02 0.842±0.00
ENST00000540303 N/A N/A N/A 0.722±0.29 0.115±0.00 N/A 13.349±0.00 26.651±0.00 N/A N/A N/A 0.133±0.05 0.145±0.00 0.418±0.00
ENST00000561690 0.024±0.00 N/A N/A N/A 0.258±0.00 N/A N/A 40.697±0.00 N/A N/A N/A N/A N/A 0.166±0.00
ENST00000566168 N/A N/A N/A N/A 0.241±0.00 N/A N/A N/A N/A 0.229±0.00 N/A N/A 0.063±0.00 0.479±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000031722 ENSMUST00000074898 850.564±641.93 76.597±29.66 11.757±3.66 0.165±0.06 262.611±57.60 5.655±2.52 20.942±14.14 15.337±1.17 801.460±555.42 569.502±31.96 7.646±4.44 68.198±14.79 7.388±14.13 3.118±2.02
ENSMUSG00000031723 ENSMUST00000034159 4.809±0.56 2.792±0.69 2.160±0.69 3.109±1.56 3.276±0.68 1.902±0.52 1.978±0.42 3.873±0.44 3.003±1.09 3.084±0.46 3.566±0.66 3.125±0.76 2.619±0.90 18.528±6.86
ENSMUST00000178445 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.925±0.00 1.914±0.18 1.817±0.54 N/A

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