C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: protein tyrosine phosphatase, receptor type, C
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000262418 PTPRC 9606 + CHR_HSCHR1_3_CTG31:198650158-198733963 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000570609 PTPRC-004 198650584-198704693 protein_coding
  ENST00000570905 PTPRC-012 198708368-198711633 retained_intron
  ENST00000571847 PTPRC-009 198650584-198706658 protein_coding
  ENST00000572593 PTPRC-013 198650775-198714833 processed_transcript
  ENST00000573298 PTPRC-011 198650158-198719644 protein_coding
  ENST00000573477 PTPRC-002 198650582-198733963 protein_coding
  ENST00000573679 PTPRC-001 198650527-198733963 protein_coding
  ENST00000573971 PTPRC-003 198650649-198711107 protein_coding
  ENST00000574399 PTPRC-007 198650560-198715361 retained_intron
  ENST00000574441 PTPRC-010 198650591-198733963 protein_coding
  ENST00000574718 PTPRC-014 198650775-198714833 nonsense_mediated_decay
  ENST00000575803 PTPRC-008 198724277-198729786 retained_intron
  ENST00000575923 PTPRC-006 198650506-198733963 protein_coding
  ENST00000576833 PTPRC-005 198650582-198733963 protein_coding

Expression Patterns

No expression data.

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0001915 ISS negative regulation of T cell mediated cytotoxicity
GO:0001960 ISS negative regulation of cytokine-mediated signaling pathway
GO:0002244 IMP hematopoietic progenitor cell differentiation
GO:0002378 IMP immunoglobulin biosynthetic process
GO:0004725 IEA protein tyrosine phosphatase activity
GO:0005001 TAS transmembrane receptor protein tyrosine phosphatase activity
GO:0005515 IPI:IEA protein binding
GO:0005886 TAS plasma membrane
GO:0005887 ISS integral component of plasma membrane
GO:0005925 ISS focal adhesion
GO:0006469 ISS negative regulation of protein kinase activity
GO:0006470 ISS protein dephosphorylation
GO:0006933 IMP negative regulation of cell adhesion involved in substrate-bound cell migration
GO:0007166 TAS cell surface receptor signaling pathway
GO:0007411 TAS axon guidance
GO:0009897 IDA external side of plasma membrane
GO:0016020 IDA membrane
GO:0016311 ISS dephosphorylation
GO:0019901 IPI protein kinase binding
GO:0030217 ISS T cell differentiation
GO:0030890 IMP positive regulation of B cell proliferation
GO:0035335 IEA peptidyl-tyrosine dephosphorylation
GO:0042100 ISS B cell proliferation
GO:0042102 ISS positive regulation of T cell proliferation
GO:0044770 IMP cell cycle phase transition
GO:0045860 NAS positive regulation of protein kinase activity
GO:0048539 IMP bone marrow development
GO:0048864 IMP stem cell development
GO:0050852 IEA T cell receptor signaling pathway
GO:0050853 ISS B cell receptor signaling pathway
GO:0050857 ISS positive regulation of antigen receptor-mediated signaling pathway
GO:0051209 ISS release of sequestered calcium ion into cytosol
GO:0051607 ISS defense response to virus
GO:0051726 ISS regulation of cell cycle
GO:0070062 IDA extracellular vesicular exosome
GO:2000473 IMP positive regulation of hematopoietic stem cell migration
GO:2000648 IMP positive regulation of stem cell proliferation

Homologs

No Homologs available.

Loading