C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: cancer susceptibility candidate 15 (non-protein coding)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000272168 CASC15 9606 + 6:21664772-22214505 lincRNA
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000444265 CASC15-002 21898720-22214505 lincRNA
  ENST00000605917 CASC15-006 22147208-22151668 lincRNA
  ENST00000606197 CASC15-004 22146654-22197219 lincRNA
  ENST00000606336 CASC15-005 21664772-21909837 lincRNA
  ENST00000606851 CASC15-003 21666444-22194387 lincRNA
  ENST00000607048 CASC15-001 21668819-22194385 lincRNA

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000444265ENST00000605917ENST00000606197ENST00000606336ENST00000606851ENST00000607048
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000444265 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.181±0.00 1.143±0.00 N/A 0.929±0.00
ENST00000605917 0.056±0.00 0.087±0.00 0.440±0.00 0.696±0.30 0.505±0.34 0.171±0.10 0.184±0.00 0.156±0.00 0.405±0.00 0.370±0.29 0.088±0.00 0.556±0.22 0.044±0.00 N/A
ENST00000606197 N/A N/A N/A 1.665±0.00 0.233±0.00 0.174±0.00 0.183±0.00 0.193±0.00 0.313±0.00 0.194±0.00 0.069±0.00 0.366±0.22 0.044±0.02 N/A
ENST00000606336 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.517±0.00 N/A 0.392±0.00 0.109±0.00 0.304±0.00
ENST00000606851 N/A N/A N/A N/A 1.184±0.00 N/A 0.715±0.00 N/A N/A N/A N/A 1.480±0.17 N/A N/A
ENST00000607048 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.090±0.03 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00084D CIL_00084D_0001 VISTA 6:21286615-21889291
CIL_0008YC CIL_0008YC_0001 VISTA 6:21546248-22147982

Gene Ontology
No GO terms available.

Homologs

No Homologs available.

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