C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: CWC25 spliceosome-associated protein homolog (S. cerevisiae)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000273559 CWC25 9606 - 17:38800434-38825481 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000611845 CWC25-007 38806503-38809808 retained_intron
  ENST00000614790 CWC25-001 38800434-38825481 protein_coding
  ENST00000618122 CWC25-004 38802815-38815735 nonsense_mediated_decay
  ENST00000619299 CWC25-003 38801725-38825315 nonsense_mediated_decay
  ENST00000619462 CWC25-009 38802840-38810595 nonsense_mediated_decay
  ENST00000619818 CWC25-002 38806800-38825355 processed_transcript
  ENST00000622665 CWC25-006 38810354-38825306 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000611845ENST00000614790ENST00000618122ENST00000619299ENST00000619818
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000611845 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.669±0.00 N/A N/A N/A
ENST00000614790 3.421±0.00 4.323±0.00 0.511±0.00 1.300±0.42 2.634±1.98 1.644±0.00 1.846±0.00 1.849±0.87 1.262±0.40 1.189±0.11 1.247±0.00 4.885±2.73 3.664±1.13 9.411±4.94
ENST00000618122 N/A N/A N/A 0.262±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000619299 2.930±0.00 2.457±0.00 0.320±0.00 2.255±0.00 2.072±1.59 1.658±0.93 0.808±0.64 5.180±0.00 0.777±0.17 2.436±1.50 2.081±1.22 4.131±0.88 2.731±1.63 8.761±4.25
ENST00000619818 N/A N/A N/A 2.053±0.00 N/A 1.686±0.00 N/A N/A N/A N/A N/A N/A N/A 2.562±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000SH CIL_0000SH_0001 CGP 17:38765689-38825481
CIL_00003Z CIL_00003Z_0001 CGP 17:38800434-38841455

Gene Ontology
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000003382 cwc25 CWC25 spliceosome-associated protein homolog (S. cerevisiae) protein_coding Danio_rerio
ENSMUSG00000018541 Cwc25 CWC25 spliceosome-associated protein homolog (S. cerevisiae) protein_coding Mus_musculus

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