C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0000SH_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000276293-ENSG00000273559 CGP 9606 17:38765689-38825481
GeneTranscriptPositionBiotype
ENSG00000273559 (CWC25)
CWC25 spliceosome-associated protein homolog (S. cerevisiae)
ENST00000611845 (CWC25-007) 38806503-38809808 retained_intron
ENST00000614790 (CWC25-001) 38800434-38825481 protein_coding
ENST00000618122 (CWC25-004) 38802815-38815735 nonsense_mediated_decay
ENST00000619299 (CWC25-003) 38801725-38825315 nonsense_mediated_decay
ENST00000619462 (CWC25-009) 38802840-38810595 nonsense_mediated_decay
ENST00000619818 (CWC25-002) 38806800-38825355 processed_transcript
ENST00000622665 (CWC25-006) 38810354-38825306 nonsense_mediated_decay
CIL_0000SH_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000018547-ENSMUSG00000018541 CGP 10090 11:97715157-97766556
GeneTranscriptPositionBiotype
ENSMUSG00000018541 (Cwc25)
CWC25 spliceosome-associated protein homolog (S. cerevisiae)
ENSMUST00000018685 (Cwc25-001) 97745615-97766556 protein_coding
ENSMUST00000107579 (Cwc25-002) 97756261-97766540 protein_coding
ENSMUST00000124356 (Cwc25-003) 97745481-97751170 processed_transcript
ENSMUST00000152395 (Cwc25-004) 97747668-97752710 protein_coding
ENSMUSG00000018547 (Pip4k2b)
phosphatidylinositol-5-phosphate 4-kinase, type II, beta
ENSMUST00000018691 (Pip4k2b-001) 97715157-97744704 protein_coding
ENSMUST00000144012 (Pip4k2b-002) 97720396-97726743 processed_transcript
ENSMUSG00000085145 (Gm11614)
predicted gene 11614
ENSMUST00000137598 (Gm11614-001) 97723651-97725711 antisense
ENSMUSG00000098919 (Mir8102)
microRNA 8102
ENSMUST00000184148 (Mir8102-201) 97744897-97745035 miRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000SH_0001ENSG00000273559ENST00000611845ENST00000614790ENST00000618122ENST00000619299ENST00000619462ENST00000619818ENST00000622665CIL_0000SH_0002ENSMUSG00000018541ENSMUST00000018685ENSMUST00000107579ENSMUST00000124356ENSMUST00000152395ENSMUSG00000018547ENSMUST00000018691ENSMUST00000144012ENSMUSG00000085145ENSMUST00000137598ENSMUSG00000098919ENSMUST00000184148
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000SH_0001ENSG00000273559ENST00000611845ENST00000614790ENST00000618122ENST00000619299ENST00000619818CIL_0000SH_0002ENSMUSG00000018541ENSMUST00000018685ENSMUST00000107579ENSMUST00000124356ENSMUSG00000018547ENSMUST00000018691ENSMUST00000144012ENSMUSG00000085145ENSMUST00000137598ENSMUSG00000098919ENSMUST00000184148
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000273559 ENST00000611845 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 2.669±0.00 N/A N/A N/A
ENST00000614790 3.421±0.00 4.323±0.00 0.511±0.00 1.300±0.42 2.634±1.98 1.644±0.00 1.846±0.00 1.849±0.87 1.262±0.40 1.189±0.11 1.247±0.00 4.885±2.73 3.664±1.13 9.411±4.94
ENST00000618122 N/A N/A N/A 0.262±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000619299 2.930±0.00 2.457±0.00 0.320±0.00 2.255±0.00 2.072±1.59 1.658±0.93 0.808±0.64 5.180±0.00 0.777±0.17 2.436±1.50 2.081±1.22 4.131±0.88 2.731±1.63 8.761±4.25
ENST00000619462 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000619818 N/A N/A N/A 2.053±0.00 N/A 1.686±0.00 N/A N/A N/A N/A N/A N/A N/A 2.562±0.00
ENST00000622665 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000018541 ENSMUST00000018685 1.977±0.44 1.332±0.37 3.335±1.95 4.215±0.38 1.218±0.39 1.776±0.32 0.935±0.25 1.899±0.30 2.331±1.19 1.833±0.27 1.703±0.63 2.588±2.18 7.555±1.80 2.082±0.10
ENSMUST00000107579 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.835±0.06 N/A N/A
ENSMUST00000124356 1.959±1.27 4.319±0.79 1.289±0.31 2.723±0.67 2.752±0.88 2.674±0.65 1.324±0.33 2.278±0.25 1.592±0.73 3.114±0.69 N/A 2.964±1.57 1.287±0.34 1.205±0.13
ENSMUST00000152395 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000018547 ENSMUST00000018691 10.037±1.83 8.323±1.06 8.428±0.06 30.132±6.37 11.938±0.65 3.557±0.32 5.717±0.40 4.523±0.18 5.150±0.84 7.269±0.28 18.805±0.44 10.542±1.06 5.185±2.03 1.128±0.37
ENSMUST00000144012 N/A N/A N/A 38.892±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A 1.793±0.00
ENSMUSG00000085145 ENSMUST00000137598 0.387±0.05 0.183±0.09 0.069±0.03 0.311±0.04 0.129±0.06 0.112±0.00 0.049±0.00 0.048±0.00 0.061±0.04 0.272±0.03 0.153±0.07 0.351±0.18 0.063±0.02 0.121±0.07
ENSMUSG00000098919 ENSMUST00000184148 826.699±0.00 N/A N/A 11.572±0.00 587.615±0.00 N/A N/A 720.043±320.76 3.712±0.00 N/A 2.526±0.00 N/A N/A 324.272±311.20

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