C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: Rho GTPase activating protein 23
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000275832 ARHGAP23 9606 + 17:38428418-38512392 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000614693 ARHGAP23-004 38497793-38501124 protein_coding
  ENST00000616767 ARHGAP23-007 38453690-38458196 processed_transcript
  ENST00000616909 ARHGAP23-008 38471939-38482558 protein_coding
  ENST00000617798 ARHGAP23-010 38490485-38491744 retained_intron
  ENST00000618325 ARHGAP23-011 38500333-38510118 retained_intron
  ENST00000618942 ARHGAP23-002 38457400-38466272 protein_coding
  ENST00000619156 ARHGAP23-003 38469580-38482143 nonsense_mediated_decay
  ENST00000620325 ARHGAP23-009 38482523-38490144 nonsense_mediated_decay
  ENST00000620329 ARHGAP23-005 38490462-38510060 protein_coding
  ENST00000620417 ARHGAP23-001 38428486-38510136 protein_coding
  ENST00000622683 ARHGAP23-006 38428418-38512392 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverMuscleOvaryPlacentaTestisENST00000618325ENST00000618942ENST00000620329ENST00000620417ENST00000622683
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Muscle Ovary Placenta Testis
ENST00000618325 N/A N/A N/A N/A N/A 1.621±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000618942 N/A N/A 0.561±0.00 N/A N/A N/A N/A 0.663±0.00 N/A 1.361±0.00 N/A N/A N/A
ENST00000620329 N/A N/A 1.125±0.00 9.901±0.00 N/A 3.114±0.00 3.487±0.00 N/A N/A 3.001±0.00 4.018±0.00 N/A N/A
ENST00000620417 N/A N/A N/A N/A N/A 0.139±0.00 N/A 0.112±0.00 N/A N/A N/A N/A N/A
ENST00000622683 1.233±0.00 22.895±0.00 0.101±0.00 23.286±20.47 2.992±1.40 3.652±3.38 0.737±0.00 5.257±0.00 1.006±0.00 N/A 10.854±8.82 21.240±4.75 7.113±1.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000SJ CIL_0000SJ_0001 CGP 17:38352228-38512392

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005096 IEA GTPase activator activity
GO:0005515 IEA protein binding
GO:0005622 IEA intracellular
GO:0005829 TAS cytosol
GO:0007165 IEA signal transduction
GO:0007264 TAS small GTPase mediated signal transduction
GO:0043547 IEA positive regulation of GTPase activity
GO:0051056 TAS regulation of small GTPase mediated signal transduction
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000026840 arhgap23b Rho GTPase activating protein 23b protein_coding Danio_rerio
ENSDARG00000052950 arhgap23a Rho GTPase activating protein 23a protein_coding Danio_rerio
ENSMUSG00000049807 Arhgap23 Rho GTPase activating protein 23 protein_coding Mus_musculus

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