C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary

CIL_0000SJ_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000274211-ENSG00000275832 CGP 9606 17:38352228-38512392
GeneTranscriptPositionBiotype
ENSG00000274211 (SOCS7)
suppressor of cytokine signaling 7
ENST00000612932 (SOCS7-001) 38352245-38405593 protein_coding
ENST00000613678 (SOCS7-002) 38352228-38399648 protein_coding
ENST00000617360 (SOCS7-003) 38352551-38399633 retained_intron
ENST00000617765 (SOCS7-004) 38352943-38377738 protein_coding
ENSG00000276170 (AC124789.1)
ENST00000613481 (AC124789.1-006) 38451306-38452363 retained_intron
ENST00000615582 (AC124789.1-005) 38451056-38451688 antisense
ENST00000617855 (AC124789.1-002) 38450588-38452444 antisense
ENST00000617990 (AC124789.1-001) 38450394-38452399 antisense
ENST00000619955 (AC124789.1-004) 38451161-38451903 retained_intron
ENST00000622796 (AC124789.1-003) 38450626-38451946 antisense
CIL_0000SJ_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000038485-ENSMUSG00000049807 CGP 10090 11:97362551-97502402
GeneTranscriptPositionBiotype
ENSMUSG00000038485 (Socs7)
suppressor of cytokine signaling 7
ENSMUST00000045540 (Socs7-001) 97362551-97398542 protein_coding
ENSMUST00000149212 (Socs7-002) 97377437-97378667 processed_transcript
ENSMUSG00000047988 (4933428G20Rik)
RIKEN cDNA 4933428G20 gene
ENSMUST00000056955 (4933428G20Rik-001) 97490783-97500340 protein_coding
ENSMUSG00000049807 (Arhgap23)
Rho GTPase activating protein 23
ENSMUST00000093940 (Arhgap23-002) 97491144-97502398 protein_coding
ENSMUST00000107601 (Arhgap23-201) 97450160-97502400 protein_coding
ENSMUST00000121799 (Arhgap23-003) 97415533-97502402 protein_coding
ENSMUST00000142465 (Arhgap23-001) 97452130-97502402 nonsense_mediated_decay
ENSMUST00000152933 (Arhgap23-004) 97436285-97444228 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000SJ_0001ENSG00000274211ENST00000612932ENST00000613678ENST00000617360ENST00000617765ENSG00000276170ENST00000613481ENST00000615582ENST00000617855ENST00000617990ENST00000619955ENST00000622796CIL_0000SJ_0002ENSMUSG00000038485ENSMUST00000045540ENSMUST00000149212ENSMUSG00000047988ENSMUST00000056955ENSMUSG00000049807ENSMUST00000093940ENSMUST00000107601ENSMUST00000121799ENSMUST00000142465ENSMUST00000152933
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0000SJ_0001ENSG00000274211ENST00000612932ENST00000613678ENSG00000276170ENST00000613481ENST00000615582ENST00000617855ENST00000617990ENST00000619955ENST00000622796CIL_0000SJ_0002ENSMUSG00000038485ENSMUST00000045540ENSMUST00000149212ENSMUSG00000047988ENSMUST00000056955ENSMUSG00000049807ENSMUST00000093940ENSMUST00000107601ENSMUST00000121799ENSMUST00000142465
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000274211 ENST00000612932 N/A N/A N/A 3.953±0.03 N/A 1.004±0.00 0.601±0.38 N/A N/A N/A 0.953±0.04 N/A N/A 14.307±3.32
ENST00000613678 N/A N/A N/A N/A 1.489±0.00 N/A N/A N/A 2.765±0.00 1.337±0.00 2.515±0.00 N/A N/A 33.908±11.48
ENST00000617360 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000617765 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000276170 ENST00000613481 N/A N/A N/A N/A N/A N/A 0.073±0.00 N/A N/A 1.278±0.00 N/A 0.559±0.49 6.405±0.00 0.314±0.00
ENST00000615582 N/A N/A N/A N/A 0.170±0.00 N/A 0.306±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000617855 N/A 0.324±0.00 N/A N/A 0.122±0.00 0.306±0.00 N/A N/A N/A 2.968±0.00 N/A N/A 3.461±0.00 N/A
ENST00000617990 0.193±0.00 N/A N/A 0.290±0.00 N/A 0.035±0.00 0.091±0.01 1.139±0.17 N/A 3.098±0.00 0.283±0.00 0.750±0.52 13.198±7.13 N/A
ENST00000619955 N/A N/A N/A 0.322±0.00 0.119±0.00 N/A N/A N/A N/A N/A N/A 0.095±0.00 N/A 0.266±0.00
ENST00000622796 N/A 1.875±0.00 N/A 0.140±0.00 N/A 0.302±0.19 0.193±0.02 N/A N/A 1.121±0.00 N/A 0.421±0.11 10.038±4.35 N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000038485 ENSMUST00000045540 1.084±0.78 4.252±1.38 0.797±0.35 9.462±4.59 2.857±1.17 2.707±1.26 1.939±0.70 2.294±0.67 0.526±0.37 3.911±0.59 4.537±0.83 6.586±2.98 1.146±0.40 34.801±13.61
ENSMUST00000149212 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 125.413±0.00
ENSMUSG00000047988 ENSMUST00000056955 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 15.104±1.75
ENSMUSG00000049807 ENSMUST00000093940 8.656±3.82 14.262±7.90 5.570±1.06 2.205±0.00 5.426±0.86 2.470±0.81 2.270±0.46 1.683±0.26 6.466±4.08 12.630±0.44 0.993±0.12 7.755±3.24 4.168±1.12 N/A
ENSMUST00000107601 2.483±0.23 4.896±0.75 4.134±0.82 7.900±2.74 4.301±2.44 1.415±0.57 0.722±0.00 1.164±0.40 2.075±1.33 6.924±0.87 0.313±0.06 3.596±1.27 1.137±0.07 N/A
ENSMUST00000121799 7.069±1.43 5.060±0.75 3.842±0.66 3.663±1.60 3.280±1.09 1.281±0.43 2.235±0.43 2.488±1.05 3.446±3.06 4.467±1.14 1.185±0.62 5.498±2.07 4.653±2.06 5.591±2.33
ENSMUST00000142465 N/A N/A N/A 7.645±8.16 N/A N/A N/A N/A N/A N/A 0.631±0.04 5.954±0.97 17.067±2.59 1.059±0.00
ENSMUST00000152933 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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