C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: RAD52 motif containing 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000278023 RDM1 9606 - 17:35918066-35930773 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000612980 RDM1-011 35918342-35930727 protein_coding
  ENST00000613308 RDM1-004 35922478-35930740 protein_coding
  ENST00000615024 RDM1-014 35918342-35930282 nonsense_mediated_decay
  ENST00000615288 RDM1-010 35918342-35930727 nonsense_mediated_decay
  ENST00000615378 RDM1-003 35922481-35930299 protein_coding
  ENST00000616596 RDM1-002 35918066-35930727 protein_coding
  ENST00000617591 RDM1-015 35918342-35930282 protein_coding
  ENST00000618511 RDM1-012 35918342-35930282 nonsense_mediated_decay
  ENST00000619193 RDM1-008 35918342-35930727 nonsense_mediated_decay
  ENST00000619262 RDM1-005 35918080-35930769 protein_coding
  ENST00000619368 RDM1-009 35918342-35930727 nonsense_mediated_decay
  ENST00000619828 RDM1-013 35918342-35930282 protein_coding
  ENST00000619876 RDM1-007 35922155-35930753 protein_coding
  ENST00000620284 RDM1-001 35918066-35930773 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonKidneyOvaryPlacentaTestisENST00000612980ENST00000613308ENST00000615378ENST00000616596ENST00000617591ENST00000618511ENST00000619262ENST00000619368ENST00000619876ENST00000620284
Transcript ID Adrenal Brain Breast Colon Kidney Ovary Placenta Testis
ENST00000612980 N/A N/A N/A N/A N/A N/A 0.351±0.05 N/A
ENST00000613308 N/A 0.027±0.00 N/A N/A N/A N/A 0.166±0.00 0.988±0.00
ENST00000615378 N/A N/A N/A N/A 0.079±0.00 0.100±0.00 0.187±0.00 N/A
ENST00000616596 0.029±0.00 N/A N/A 0.067±0.00 N/A 0.163±0.08 0.149±0.00 N/A
ENST00000617591 0.183±0.00 N/A N/A 0.035±0.00 N/A N/A N/A N/A
ENST00000618511 N/A N/A N/A N/A N/A 1.354±0.00 0.095±0.00 N/A
ENST00000619262 N/A N/A N/A N/A N/A 0.134±0.07 0.086±0.00 0.568±0.00
ENST00000619368 N/A N/A 0.124±0.00 N/A N/A N/A N/A N/A
ENST00000619876 N/A 0.034±0.00 N/A N/A N/A 0.026±0.00 0.029±0.00 N/A
ENST00000620284 N/A 0.111±0.00 0.060±0.00 N/A N/A 0.199±0.00 0.169±0.05 4.002±0.57

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003676 IEA nucleic acid binding
GO:0003677 IEA DNA binding
GO:0003723 IEA RNA binding
GO:0005730 IDA nucleolus
GO:0005737 IDA cytoplasm
GO:0006281 IEA DNA repair
GO:0006310 IEA DNA recombination

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000038186 RDM1 RAD52 motif containing 1 protein_coding Danio_rerio
ENSMUSG00000010362 Rdm1 RAD52 motif 1 protein_coding Mus_musculus

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