C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ribosomal protein S4, Y-linked 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000279950 RPS4Y1 9606 + Y:2841625-2866894 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000624330 RPS4Y1-201 2841625-2866894 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000624330
Transcript ID Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000624330 176.947±0.00 3.667±0.00 18.067±0.00 0.019±0.00 12.366±12.35 37.759±25.16 26.642±0.00 41.253±7.21 107.225±80.16 83.027±0.00 12.687±12.65 166.589±18.88 140.854±35.99

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology
GO IDEvidence TypeGO Description
GO:0000184 TAS nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0003723 TAS:IEA RNA binding
GO:0003735 IMP:IEA structural constituent of ribosome
GO:0005622 IEA intracellular
GO:0005634 IDA nucleus
GO:0005829 TAS cytosol
GO:0005840 IEA ribosome
GO:0005844 IDA polysome
GO:0006412 IMP:IEA translation
GO:0006413 TAS translational initiation
GO:0006414 TAS translational elongation
GO:0006415 TAS translational termination
GO:0006614 TAS SRP-dependent cotranslational protein targeting to membrane
GO:0007275 IMP multicellular organismal development
GO:0010467 TAS gene expression
GO:0016020 IDA membrane
GO:0016032 TAS viral process
GO:0016070 TAS RNA metabolic process
GO:0016071 TAS mRNA metabolic process
GO:0019058 TAS viral life cycle
GO:0019083 TAS viral transcription
GO:0019843 IEA rRNA binding
GO:0022627 NAS cytosolic small ribosomal subunit
GO:0044267 TAS cellular protein metabolic process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000014690 rps4x ribosomal protein S4, X-linked protein_coding Danio_rerio

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