C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: ribosomal protein S4, X-linked
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSDARG00000014690 rps4x 7955 - 7:53088995-53094879 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSDART00000007957 rps4x-003 53089036-53094833 retained_intron
  ENSDART00000128917 rps4x-001 53088995-53094879 protein_coding
  ENSDART00000133105 rps4x-002 53090784-53094805 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000128917
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000128917 286.050±17.12 1383.395±283.46 387.768±543.44 898.465±0.00 828.755±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000YL CIL_0000YL_0001 CGP 7:53088995-53103912

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003723 IEA RNA binding
GO:0003735 IEA structural constituent of ribosome
GO:0005622 IEA intracellular
GO:0005840 IEA ribosome
GO:0006412 IEA translation
GO:0007420 IMP brain development
GO:0009790 IMP embryo development
GO:0019843 IEA rRNA binding
GO:0030529 IEA ribonucleoprotein complex

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000129824 RPS4Y1 ribosomal protein S4, Y-linked 1 protein_coding Homo_sapiens
ENSG00000198034 RPS4X ribosomal protein S4, X-linked protein_coding Homo_sapiens
ENSG00000279854 RPS4Y2 ribosomal protein S4, Y-linked 2 protein_coding Homo_sapiens
ENSG00000279950 RPS4Y1 ribosomal protein S4, Y-linked 1 protein_coding Homo_sapiens
ENSG00000280146 RPS4Y2 ribosomal protein S4, Y-linked 2 protein_coding Homo_sapiens
ENSMUSG00000031320 Rps4x ribosomal protein S4, X-linked protein_coding Mus_musculus
ENSMUSG00000063171 Rps4l ribosomal protein S4-like protein_coding Mus_musculus
ENSMUSG00000098559 Gm15013 predicted gene 15013 protein_coding Mus_musculus

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