C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: sodium channel, nonvoltage-gated 1 gamma
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000000216 Scnn1g 10090 + 7:121734479-121768475 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000000221 Scnn1g-001 121734479-121768475 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000000221
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000000221 0.114±0.01 0.041±0.02 14.069±1.36 0.016±0.01 0.188±0.04 1.752±0.26 0.160±0.02 15.637±1.25 0.008±0.00 42.069±12.53 0.026±0.01 0.065±0.03 0.883±0.35 0.024±0.01

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003CL CIL_0003CL_0002 CGP 7:121642021-121768475
CIL_0006D7 CIL_0006D7_0002 CGP 7:121734479-121918515

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005272 IDA sodium channel activity
GO:0005515 IEA protein binding
GO:0005887 ISS integral component of plasma membrane
GO:0006814 IDA sodium ion transport
GO:0009897 IDA external side of plasma membrane
GO:0015280 IDA ligand-gated sodium channel activity
GO:0016020 IDA membrane
GO:0016021 IDA integral component of membrane
GO:0034706 IGI sodium channel complex
GO:0035725 IEA sodium ion transmembrane transport
GO:0050699 IPI WW domain binding
GO:0050891 ISS multicellular organismal water homeostasis
GO:0050896 IEA response to stimulus
GO:0050909 IEA sensory perception of taste
GO:0055078 ISS sodium ion homeostasis
GO:0070062 IEA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSG00000166828 SCNN1G sodium channel, non-voltage-gated 1, gamma subunit protein_coding Homo_sapiens

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